Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92274 | Sorghum | cytosol | 96.56 | 96.34 |
| Zm00001d034299_P001 | Maize | cytosol | 16.51 | 91.14 |
| Os03t0349000-01 | Rice | cytosol | 90.6 | 90.8 |
| TraesCS4B01G153500.3 | Wheat | cytosol | 88.88 | 89.29 |
| HORVU5Hr1G021240.1 | Barley | cytosol | 88.76 | 89.17 |
| TraesCS4D01G154300.3 | Wheat | cytosol | 88.65 | 89.16 |
| TraesCS4A01G141000.3 | Wheat | cytosol | 88.53 | 88.94 |
| Zm00001d046306_P001 | Maize | extracellular | 14.91 | 86.67 |
| GSMUA_Achr2P04240_001 | Banana | cytosol | 73.05 | 76.01 |
| PGSC0003DMT400077823 | Potato | cytosol | 10.21 | 71.77 |
| VIT_08s0007g08940.t01 | Wine grape | cytosol | 67.66 | 68.37 |
| KRH09759 | Soybean | cytosol, endoplasmic reticulum, nucleus | 65.02 | 65.85 |
| KRH23559 | Soybean | nucleus | 64.68 | 65.51 |
| Solyc04g016240.2.1 | Tomato | cytosol, nucleus, plastid | 63.88 | 64.62 |
| PGSC0003DMT400033102 | Potato | cytosol | 60.21 | 61.76 |
| AT2G41620.1 | Thale cress | nucleus | 60.89 | 61.67 |
| CDY14781 | Canola | cytosol | 60.44 | 61.07 |
| CDY06913 | Canola | cytosol | 60.44 | 61.07 |
| Bra016924.1-P | Field mustard | cytosol | 60.44 | 61.07 |
| Bra007321.1-P | Field mustard | cytosol | 59.63 | 60.32 |
| CDY06112 | Canola | cytosol | 59.4 | 60.02 |
| CDX72047 | Canola | cytosol | 59.29 | 59.98 |
| AT3G57350.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 59.06 | 59.88 |
| PGSC0003DMT400077824 | Potato | cytosol | 12.16 | 58.89 |
Protein Annotations
| MapMan:23.5.1.1.3.1 | UniProt:A0A1D6K314 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0006810 |
| GO:GO:0006913 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0017056 | GO:GO:0051028 |
| InterPro:Nucleoporin_int_Nup93/Nic96 | ProteinID:ONL98043.1 | ProteinID:ONL98044.1 | ProteinID:ONL98047.1 | PFAM:PF04097 | PANTHER:PTHR11225 |
| UniParc:UPI0008455F67 | EnsemblPlantsGene:Zm00001d029142 | EnsemblPlants:Zm00001d029142_P007 | EnsemblPlants:Zm00001d029142_T007 | SEG:seg | : |
Description
Nuclear pore complex protein NUP93A
Coordinates
chr1:-:60327307..60337774
Molecular Weight (calculated)
96637.9 Da
IEP (calculated)
7.056
GRAVY (calculated)
-0.255
Length
872 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVGGSGGG GGDDAEMGGW TGLLHSSTKL LEQAAPTPHF PPLQRNLDQL EALSTKLKAK TIRSEAPSQS LSATRLLARE GINAEQLARD LKSFELKTTF
101: EDVFPSEATT VEEYLQQLHE MAIVSSIQEA QKDNLKSFNN YMMQVLEDDW QKEKRDFLQS LSRLSTLPKR NTNLSTSGLG RPASMPPSTS SLHAPSGLPS
201: AEVMPIPNKT IIEKKSSVYA GVVRDLNDSR GRSLPFNPAT AFRAAYESLS IDAIGTKSVS MQKVWHLIQA LVGEGLTHRN VSRKMSLVVG ARHHLEWGHE
301: KYILETINSH PALAALGGSV GNLQKIRAFL RVRLRDQGVL DFDATDLRRQ PPVDTTWQQI YFCLRTGYYD EARQVAQSSR TAYNFAPLLA DWISTNGAVS
401: PETALAASEE CDKMLRMGDR PGRPGYDRKK LLLYAIICGC RRQIERMLKD LPTLFNTIED FLWFKLSALR EYTNASSSNL MNEGLVPYTL DDLQSYLNKF
501: EPSYYTKNGK DPLVYPYILF LSIQLLPAIL YLSKEVGEDG YHVDAVHISI ALADHSVLPD GIGSGQKIGV MDACAEAASI IRQYGSIYLR NGNIDLALEY
601: YAQAAAAMGG GEASWIGEGH ADKQRQRSLM LKQLLMEILL RDGGIQLLLG PSGMGEEGEL KKYMMDWRSR QQFLLEAAHR CQEAGLYDKA VEIHKRVGAF
701: AMALQTINKC LSDAVCAMAR SMLDGESRAA ALIHSGNEIL ETARYSSEAS IQEKDLISEQ QTVLRQLEAI LHIYRLARAG QTVDALRETI RLPFLHLDPK
801: APNVTVDIFR NLSPHVQACV PDLLKVALNC IDNVRDTDGT LRAVKSKIAN LVASNMSRNW PQDLYQKVAQ CI
101: EDVFPSEATT VEEYLQQLHE MAIVSSIQEA QKDNLKSFNN YMMQVLEDDW QKEKRDFLQS LSRLSTLPKR NTNLSTSGLG RPASMPPSTS SLHAPSGLPS
201: AEVMPIPNKT IIEKKSSVYA GVVRDLNDSR GRSLPFNPAT AFRAAYESLS IDAIGTKSVS MQKVWHLIQA LVGEGLTHRN VSRKMSLVVG ARHHLEWGHE
301: KYILETINSH PALAALGGSV GNLQKIRAFL RVRLRDQGVL DFDATDLRRQ PPVDTTWQQI YFCLRTGYYD EARQVAQSSR TAYNFAPLLA DWISTNGAVS
401: PETALAASEE CDKMLRMGDR PGRPGYDRKK LLLYAIICGC RRQIERMLKD LPTLFNTIED FLWFKLSALR EYTNASSSNL MNEGLVPYTL DDLQSYLNKF
501: EPSYYTKNGK DPLVYPYILF LSIQLLPAIL YLSKEVGEDG YHVDAVHISI ALADHSVLPD GIGSGQKIGV MDACAEAASI IRQYGSIYLR NGNIDLALEY
601: YAQAAAAMGG GEASWIGEGH ADKQRQRSLM LKQLLMEILL RDGGIQLLLG PSGMGEEGEL KKYMMDWRSR QQFLLEAAHR CQEAGLYDKA VEIHKRVGAF
701: AMALQTINKC LSDAVCAMAR SMLDGESRAA ALIHSGNEIL ETARYSSEAS IQEKDLISEQ QTVLRQLEAI LHIYRLARAG QTVDALRETI RLPFLHLDPK
801: APNVTVDIFR NLSPHVQACV PDLLKVALNC IDNVRDTDGT LRAVKSKIAN LVASNMSRNW PQDLYQKVAQ CI
001: MANDQEMSGW TDLLHSSSKL LEQAAPSSQF PPLQRNLDQL EALSKKLKAK TLRNEAPSQS IAATRLLARE GINAEQLARD LKSFELKTTF EDVFPAEATS
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS PRVSSTPGKE LVALANIPIH
201: EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP
301: TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC
401: EKMLRMGDRL GRTAYDKKKL LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD DLQAYLNKFE PSYYTKNGKD
501: PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG
601: QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL
701: SEAICSLARG RLDGESRTSG LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK LPFLHLDPRM PDATADVFQS
801: ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF LASNTHRNWP RDLYEKVARS F
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS PRVSSTPGKE LVALANIPIH
201: EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP
301: TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC
401: EKMLRMGDRL GRTAYDKKKL LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD DLQAYLNKFE PSYYTKNGKD
501: PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG
601: QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL
701: SEAICSLARG RLDGESRTSG LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK LPFLHLDPRM PDATADVFQS
801: ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF LASNTHRNWP RDLYEKVARS F
Arabidopsis Description
NUP93ANuclear pore complex protein NUP93A [Source:UniProtKB/Swiss-Prot;Acc:O22224]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.