Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007321.1-P | Field mustard | cytosol | 98.73 | 98.84 |
| CDX72047 | Canola | cytosol | 97.91 | 98.03 |
| AT3G57350.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 87.14 | 87.44 |
| CDY14781 | Canola | cytosol | 85.28 | 85.28 |
| CDY06913 | Canola | cytosol | 84.94 | 84.94 |
| VIT_08s0007g08940.t01 | Wine grape | cytosol | 72.07 | 72.07 |
| KRH23559 | Soybean | nucleus | 71.61 | 71.78 |
| PGSC0003DMT400077823 | Potato | cytosol | 10.31 | 71.77 |
| KRH09759 | Soybean | cytosol, endoplasmic reticulum, nucleus | 71.26 | 71.43 |
| Solyc04g016240.2.1 | Tomato | cytosol, nucleus, plastid | 70.57 | 70.65 |
| PGSC0003DMT400033102 | Potato | cytosol | 66.51 | 67.53 |
| PGSC0003DMT400077824 | Potato | cytosol | 13.44 | 64.44 |
| GSMUA_Achr2P04240_001 | Banana | cytosol | 60.02 | 61.81 |
| Os03t0349000-01 | Rice | cytosol | 60.95 | 60.46 |
| TraesCS4A01G141000.3 | Wheat | cytosol | 60.6 | 60.25 |
| TraesCS4B01G153500.3 | Wheat | cytosol | 60.25 | 59.91 |
| TraesCS4D01G154300.3 | Wheat | cytosol | 60.14 | 59.86 |
| HORVU5Hr1G021240.1 | Barley | cytosol | 60.14 | 59.79 |
| Zm00001d029142_P007 | Maize | cytosol | 60.02 | 59.4 |
| EER92274 | Sorghum | cytosol | 59.68 | 58.92 |
| Zm00001d046306_P001 | Maize | extracellular | 8.0 | 46.0 |
| Zm00001d034299_P001 | Maize | cytosol | 8.23 | 44.94 |
Protein Annotations
| EnsemblPlants:CDY06112 | EnsemblPlantsGene:GSBRNA2T00121989001 | GO:A0A078EYT6 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0017056 |
| InterPro:Nucleoporin_int_Nup93/Nic96 | PANTHER:PTHR11225 | PFAM:PF04097 | ProteinID:CDY06112 | ProteinID:CDY06112.1 | SEG:seg |
| UniParc:UPI0004EE6F66 | MapMan:23.5.1.1.3.1 | : | : | : | : |
Description
BnaA09g36680D
Coordinates
chrLK031967:+:854058..858901
Molecular Weight (calculated)
96887.7 Da
IEP (calculated)
7.323
GRAVY (calculated)
-0.369
Length
863 amino acids
Sequence
(BLAST)
(BLAST)
001: MANDQEMSGW TDLLHSSTKL LEQAAPSSQF PPLQRNLDQL EALSRKLKAK TLRSEAPSQS IAATSRLLAR EGINAEQLSR DLRSFELKTT FEDVFPAEAT
101: SVEEYLQQVH EMAMVSAIQE AQKDNVRSFN DYMLKVLEED CRKEKRDFLQ SRSKLSMLPK TKMIDTSRDT HAGQLVPVAS SPQVSSNTGT ELVSLANKPI
201: HEKKAHVYAE VVKKLNSSRE RGLPFKPATS FKDAYGSLGI DLTRGKSVNV QKLWQLIQAM TGEDSAVHKG VSKRMSLVIG ARRHLECGHQ KHIMDTIQSH
301: PTQAALGGSV GNLQRIRAFL RIRLRDYGML DFDSGDARRQ PPVDTTWQQI YFCLRSGYYE EAREIAQSSR SSQQQFAPLL IEWITTGGTV TTNTAAIASE
401: ECEKLFRLGD RLGQTTYDKK KLLLYTIISG SRRQIDRILR EFSTLFNTIE DFLWFKLSCI RDVSSGSSSL VFNDGLVPYS LDDLQAYLNK FEPAYYTKNG
501: KDPLVYPYVL LLSIQLLPAI MHMSQEAGDE GYNIDAVHIA ISLVDHSVLS EGSGTGHKLS VMDANAEASS LIRQYGSMYL HHGDMQMTLE YYAQAAIAVG
601: GGQLVWSGRS NVDQQRQRNL MLKQLLTEIL LREGGIYFLL GARGSGEEGE LGRFFPDSKS RQQFLIEAAN QCQDAGLFEK SIEIQKRVGT YAAALETINK
701: CLSEAICSLL RGRSDGESRT AGLVLSGNEI LHTYKYYPEV CPQERERVME QETILRELEA ILSIHKLARL GNHLDALKEA AKLPFLHLDP RLSDTTPDEF
801: QRASSYFKTC VPDLLKVVLT CLDNVPDRDG SIRVMRSKIA GFLASNTHQN WPRDLYEKVA RSF
101: SVEEYLQQVH EMAMVSAIQE AQKDNVRSFN DYMLKVLEED CRKEKRDFLQ SRSKLSMLPK TKMIDTSRDT HAGQLVPVAS SPQVSSNTGT ELVSLANKPI
201: HEKKAHVYAE VVKKLNSSRE RGLPFKPATS FKDAYGSLGI DLTRGKSVNV QKLWQLIQAM TGEDSAVHKG VSKRMSLVIG ARRHLECGHQ KHIMDTIQSH
301: PTQAALGGSV GNLQRIRAFL RIRLRDYGML DFDSGDARRQ PPVDTTWQQI YFCLRSGYYE EAREIAQSSR SSQQQFAPLL IEWITTGGTV TTNTAAIASE
401: ECEKLFRLGD RLGQTTYDKK KLLLYTIISG SRRQIDRILR EFSTLFNTIE DFLWFKLSCI RDVSSGSSSL VFNDGLVPYS LDDLQAYLNK FEPAYYTKNG
501: KDPLVYPYVL LLSIQLLPAI MHMSQEAGDE GYNIDAVHIA ISLVDHSVLS EGSGTGHKLS VMDANAEASS LIRQYGSMYL HHGDMQMTLE YYAQAAIAVG
601: GGQLVWSGRS NVDQQRQRNL MLKQLLTEIL LREGGIYFLL GARGSGEEGE LGRFFPDSKS RQQFLIEAAN QCQDAGLFEK SIEIQKRVGT YAAALETINK
701: CLSEAICSLL RGRSDGESRT AGLVLSGNEI LHTYKYYPEV CPQERERVME QETILRELEA ILSIHKLARL GNHLDALKEA AKLPFLHLDP RLSDTTPDEF
801: QRASSYFKTC VPDLLKVVLT CLDNVPDRDG SIRVMRSKIA GFLASNTHQN WPRDLYEKVA RSF
001: MANDQEMSGW TDLLHSSSKL LEQAAPSSQF PPLQRNLDQL EALSKKLKAK TLRNEAPSQS IAATRLLARE GINAEQLARD LKSFELKTTF EDVFPAEATS
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS PRVSSTPGKE LVALANIPIH
201: EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP
301: TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC
401: EKMLRMGDRL GRTAYDKKKL LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD DLQAYLNKFE PSYYTKNGKD
501: PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG
601: QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL
701: SEAICSLARG RLDGESRTSG LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK LPFLHLDPRM PDATADVFQS
801: ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF LASNTHRNWP RDLYEKVARS F
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS PRVSSTPGKE LVALANIPIH
201: EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP
301: TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC
401: EKMLRMGDRL GRTAYDKKKL LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD DLQAYLNKFE PSYYTKNGKD
501: PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG
601: QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL
701: SEAICSLARG RLDGESRTSG LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK LPFLHLDPRM PDATADVFQS
801: ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF LASNTHRNWP RDLYEKVARS F
Arabidopsis Description
NUP93ANuclear pore complex protein NUP93A [Source:UniProtKB/Swiss-Prot;Acc:O22224]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.