Factsheet for GSMUA_Achr10P28650_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr8P07200_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34460.1	GSMUA_Achr8P07200_001	AT4G05420.1	18223036
AT4G34460.1	GSMUA_Achr11P...	AT5G10920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P31660_001	Banana	cytosol	86.54	86.54
Os03t0669200-01	Rice	plasma membrane	84.17	83.95
GSMUA_Achr9P09850_001	Banana	cytosol	83.91	83.91
TraesCS4A01G294000.1	Wheat	cytosol, plastid	83.64	83.42
TraesCS4D01G017800.1	Wheat	cytosol, plastid	83.38	83.16
TraesCS4B01G019900.1	Wheat	cytosol, plastid	83.38	83.16
EER93689	Sorghum	cytosol, plastid	83.11	82.89
Zm00001d033422_P001	Maize	extracellular, mitochondrion, plasma membrane	82.32	82.11
PGSC0003DMT400001906	Potato	cytosol	81.0	81.43
VIT_03s0063g02480.t01	Wine grape	cytosol	80.74	81.17
Solyc01g109560.2.1	Tomato	cytosol	80.74	81.17
KRH24483	Soybean	cytosol	80.47	80.9
KRH29472	Soybean	cytosol	80.47	80.9
KRH60850	Soybean	cytosol	79.95	80.37
KRH51535	Soybean	cytosol	79.68	80.11
Bra011536.1-P	Field mustard	cytosol	76.52	76.92
CDX75436	Canola	cytosol	76.52	76.92
CDX69061	Canola	cytosol	76.52	76.92
AT4G34460.1	Thale cress	cytosol	76.52	76.92
Bra017658.1-P	Field mustard	cytosol	75.99	76.19
Bra034628.1-P	Field mustard	cytosol	74.93	75.13
CDY46247	Canola	cytosol	68.87	75.0
CDX76284	Canola	cytosol	67.55	74.42
HORVU4Hr1G003110.2	Barley	cytosol	84.17	71.69
CDX72483	Canola	vacuole	75.99	32.54
CDY45313	Canola	endoplasmic reticulum, extracellular, vacuole	76.25	32.4

Protein Annotations

Gene3D:2.130.10.10	MapMan:26.8.1.1.2.2	MapMan:27.6.2.2	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G28650_001
EnsemblPlants:GSMUA_Achr10P28650_001	EnsemblPlants:GSMUA_Achr10T28650_001	InterPro:Gprotein_B	InterPro:Guanine_nucleotide-bd_bsu	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	UniProt:M0RM89	PFAM:PF00400	PIRSF:PIRSF002394	PRINTS:PR00319	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19850	PANTHER:PTHR19850:SF48	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI00029694A1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

Guanine nucleotide-binding protein subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr10G28650_001]

Coordinates

chr10:+:31403029..31409834

Molecular Weight (calculated)

41375.6 Da

IEP (calculated)

7.661

GRAVY (calculated)

-0.261

Length

379 amino acids

Sequence
(BLAST)

001: MSFSELKDRH VAATATVNTL RDRLNQKRQQ LLDTDVAGYA KSQGRTAVNF SSTDLVCCRT LQGHTGKVYS LDWTPEKNRI VSASQDGRLI IWNALTSQKT
101: HAIKLPCAWV MTCAFAPNGH SVACGGLDSE CSIFNLNSQV DRDGNIPVSR VLTGHKGYVS SCEFVRDQDT RLITGSGDQT CVLWDVTTGQ RISVFGGEFP
201: SGHTSDVLSI SINSSNSNMF VSGSCDATAR LWDTRIASRA IRTYHGHHGD VNSVKFFPDG QRFGTGSDDG TCRLFDMRTG HQLQVYSQQQ ANNDQDIPIV
301: TSIAFSISGR LLFAGYSNGD CYVWDTLLAE VVVNLGKLQN SHEGRISCLG LSADGSALCT GSWDKNLKIW AFGGHRKVI

Best Arabidopsis Sequence Match ( AT4G34460.1 )
(BLAST)

001: MSVSELKERH AVATETVNNL RDQLRQRRLQ LLDTDVARYS AAQGRTRVSF GATDLVCCRT LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT
101: HAIKLPCAWV MTCAFSPNGQ SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT CILWDVTTGL KTSVFGGEFQ
201: SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301: AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS WDSNLKIWAF GGHRRVI

Arabidopsis Description

GB1ELK4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.