CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX69799
CDX92967
CDX94882
CDX97066
CDY14477
CDY35482
CDY67558
CDY68484
CDY69266
CDY69491
CDY69492
CDY69930
CDY70585

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34460.1	CDX92967	AT3G22942.1	11513956
AT4G34460.1	CDX94882	AT3G22942.1	11513956
AT4G34460.1	CDY35482	AT3G22942.1	11513956
AT4G34460.1	CDY67558	AT3G22942.1	11513956
AT4G34460.1	CDY68484	AT4G05420.1	18223036
AT4G34460.1	CDY69266	AT4G05420.1	18223036
AT4G34460.1	CDY69930	AT4G05420.1	18223036
AT4G34460.1	CDY70585	AT4G05420.1	18223036
AT4G34460.1	CDX69799	AT5G10920.1	21798944
AT4G34460.1	CDX97066	AT5G10920.1	21798944
AT4G34460.1	CDY14477	AT5G10920.1	21798944
AT4G34460.1	CDY69491	AT5G10920.1	21798944
AT4G34460.1	CDY69492	AT5G10920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75436	Canola	cytosol	41.02	96.29
CDY45313	Canola	endoplasmic reticulum, extracellular, vacuole	96.72	95.96
CDX69061	Canola	cytosol	40.79	95.76
AT4G34460.1	Thale cress	cytosol	39.89	93.63
CDX76284	Canola	cytosol	35.82	92.15
CDY46247	Canola	cytosol	35.93	91.38
VIT_03s0063g02480.t01	Wine grape	cytosol	35.14	82.49
PGSC0003DMT400001906	Potato	cytosol	34.35	80.64
Solyc01g109560.2.1	Tomato	cytosol	34.24	80.37
KRH29472	Soybean	cytosol	34.24	80.37
KRH24483	Soybean	cytosol	34.12	80.11
KRH60850	Soybean	cytosol	34.12	80.11
KRH51535	Soybean	cytosol	33.9	79.58
EER93689	Sorghum	cytosol, plastid	32.77	76.32
GSMUA_Achr6P31660_001	Banana	cytosol	32.54	75.99
GSMUA_Achr10P...	Banana	cytosol	32.54	75.99
TraesCS4A01G294000.1	Wheat	cytosol, plastid	32.43	75.53
Zm00001d033422_P001	Maize	extracellular, mitochondrion, plasma membrane	32.43	75.53
Os03t0669200-01	Rice	plasma membrane	32.32	75.26
TraesCS4B01G019900.1	Wheat	cytosol, plastid	32.32	75.26
TraesCS4D01G017800.1	Wheat	cytosol, plastid	32.32	75.26
GSMUA_Achr9P09850_001	Banana	cytosol	32.2	75.2
HORVU4Hr1G003110.2	Barley	cytosol	32.66	64.94

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:2.130.10.10	MapMan:26.8.1.1.2.2	MapMan:27.6.2.2	Gene3D:3.20.20.80	GO:A0A078CBW1
EnsemblPlants:CDX72483	ProteinID:CDX72483	ProteinID:CDX72483.1	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005515	GO:GO:0005975	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00100011001
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	InterPro:Gprotein_B	InterPro:Guanine_nucleotide-bd_bsu	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00332	PFAM:PF00400	PFAM:PF07983	PRINTS:PR00319	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19850	PANTHER:PTHR19850:SF48	SMART:SM00320
SMART:SM00768	SUPFAM:SSF50978	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0004EE8A4B	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	InterPro:X8	SEG:seg

Description

BnaC07g45050D

Coordinates

chrLK031796:-:1519049..1524572

Molecular Weight (calculated)

94549.4 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.184

Length

885 amino acids

Sequence
(BLAST)

001: MAISIYFSLL LIFLSQFPSS NAEPFIGVNY GQVADNLPPP SETAKLIQST SIQKVRLYGA DPAIIKALAG TGVGIVIGTA NGDLPSLAAD PNAASQWISS
101: NVLPFYPASK IILITVGNEV LLSKDPNLVS QLLPAMQNVQ KALEAASLGG KIKVSTVHAM SVLGSSEPPS SGSFASGYQA GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF QPNAGRPDSN TGITYMNMFD AQYKRQLFTL DTAPYMRAVD AVHSALKSMG FEKVEIVVAE TGWASRGDPN EVGPSVDNAK
301: AYNGNLIAHL RSMVGTPLMP GKSVDTYIFA LYDENLKTGP SSERAFGLFK TDHSMAYDVG LAKSSGSSSN SSCQTPSGKA STGWCVSKKD ATDKQLQSSI
401: DWACGQGIDC GAIQPGGACF EPNNVASHAA FAMNMYYQKS PKRPTDCDFS QTATITSQNP SYNSCVYPGG GGGDGSTGVM NKYVNSNKIE SKKNGAVESK
501: KPKSEALMSV SELKERHAVA TETVNSLRDK LRQRRLQLLD TDVAKYSAAQ GRSPVKFGAT DLVCCRTLLG HTGKVYSLDW TPERNRIVSA SQDGRLIVWN
601: ALTSQKTHAI KLPCAWVMTC AFSPNGQTVA CGGLDSVCSI FSLSSTADKD GTVPVSRTLS GHRGYVSCCQ YVPNEDAHLI TSSGDQTCVL WDVTTGLKTS
701: VFGGEFQSGH TGDVLSVSIS GSNPNWFISG SCDTTACLWD TRAASRAVRT FHGHEGDVNT VKFFPDGYRF GTGSDDGTCR LYDLRTGHQL QVYHQAHGDG
801: ENLPVTSIAF SASGRLLFAG YANNNTCYVW DTLLGEVVLD LGELQDSHKN RISCLGMSAD GSALCTGSWD SNLKIWAFGG HRRVT

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.