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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plasma membrane
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
 extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d009745_P023
Zm00001d039165_P046
Zm00001d047667_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G34460.1 Zm00001d009745_P023 AT4G05420.1 18223036
AT4G34460.1 Zm00001d039165_P046 AT4G05420.1 18223036
AT4G34460.1 Zm00001d047667_P001 AT5G10920.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93689 Sorghum cytosol, plastid 98.42 98.42
Os03t0669200-01 Rice plasma membrane 95.0 95.0
TraesCS4A01G294000.1 Wheat cytosol, plastid 93.42 93.42
TraesCS4D01G017800.1 Wheat cytosol, plastid 93.16 93.16
TraesCS4B01G019900.1 Wheat cytosol, plastid 93.16 93.16
GSMUA_Achr6P31660_001 Banana cytosol 85.0 85.22
GSMUA_Achr9P09850_001 Banana cytosol 83.16 83.38
GSMUA_Achr10P... Banana cytosol 82.11 82.32
VIT_03s0063g02480.t01 Wine grape cytosol 79.21 79.84
HORVU4Hr1G003110.2 Barley cytosol 93.42 79.78
PGSC0003DMT400001906 Potato cytosol 78.42 79.05
Solyc01g109560.2.1 Tomato cytosol 78.16 78.78
KRH60850 Soybean cytosol 77.89 78.51
KRH51535 Soybean cytosol 77.63 78.25
KRH24483 Soybean cytosol 76.84 77.45
KRH29472 Soybean cytosol 76.84 77.45
CDX75436 Canola cytosol 76.58 77.19
CDX69061 Canola cytosol 76.58 77.19
Bra011536.1-P Field mustard cytosol 76.32 76.92
AT4G34460.1 Thale cress cytosol 75.79 76.39
Bra017658.1-P Field mustard cytosol 75.0 75.4
Bra034628.1-P Field mustard cytosol 74.47 74.87
CDY46247 Canola cytosol 68.16 74.43
CDX76284 Canola cytosol 66.84 73.84
CDX72483 Canola vacuole 75.53 32.43
CDY45313 Canola endoplasmic reticulum, extracellular, vacuole 75.26 32.06
Protein Annotations
Gene3D:2.130.10.10MapMan:26.8.1.1.2.2MapMan:27.6.2.2EntrezGene:542310UniProt:A0A1R3MG86ncoils:Coil
InterPro:G-protein_beta_WD-40_repGO:GO:0000003GO:GO:0003674GO:GO:0004871GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005834
GO:GO:0005886GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007186GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0009653GO:GO:0009719
GO:GO:0009723GO:GO:0009788GO:GO:0009791GO:GO:0009817GO:GO:0009845GO:GO:0009867
GO:GO:0009987GO:GO:0009991GO:GO:0010118GO:GO:0010154GO:GO:0016020GO:GO:0030968
GO:GO:0048364GO:GO:0048527GO:GO:0050832GO:GO:0072593GO:GO:0080008GO:GO:1905392
GO:GO:2000280InterPro:Gprotein_BInterPro:Guanine_nucleotide-bd_bsuInterPro:IPR001680InterPro:IPR015943InterPro:IPR017986
ProteinID:ONM07583.1UniProt:P49178PFAM:PF00400PIRSF:PIRSF002394PRINTS:PR00319PRINTS:PR00320
ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19850PANTHER:PTHR19850:SF48SMART:SM00320
SUPFAM:SSF50978EMBL:U12233UniParc:UPI000012B220InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CS
InterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfEnsemblPlantsGene:Zm00001d033422EnsemblPlants:Zm00001d033422_P001EnsemblPlants:Zm00001d033422_T001SEG:seg
Description
GTP binding protein2 GTP binding protein2
Coordinates
chr1:-:262592398..262598732
Molecular Weight (calculated)
41716.9 Da
IEP (calculated)
7.464
GRAVY (calculated)
-0.307
Length
380 amino acids
Sequence
(BLAST)
001: MASVAELKEK HAAATASVNS LRERLRQRRE TLLDTDVARY SKSQGRVPVS FNPTDLVCCR TLQGHSGKVY SLDWTPEKNW IVSASQDGRL IVWNALTSQK
101: THAIKLHCPW VMACAFAPNG QSVACGGLDS ACSIFNLNSQ ADRDGNMPVS RILTGHKGYV SSCQYVPDQE TRLITSSGDQ TCVLWDVTTG QRISIFGGEF
201: PSGHTADVQS VSINSSNTNM FVSGSCDTTV RLWDIRIASR AVRTYHGHED DVNSVKFFPD GHRFGTGSDD GTCRLFDMRT GHQLQVYSRE PDRNSNELPT
301: VTSIAFSISG RLLFAGYSNG DCYVWDTLLA EVVLNLGNLQ NSHDGRISCL GMSSDGSALC TGSWDKNLKI WAFSGHRKIV
Best Arabidopsis Sequence Match ( AT4G34460.1 )
(BLAST)
001: MSVSELKERH AVATETVNNL RDQLRQRRLQ LLDTDVARYS AAQGRTRVSF GATDLVCCRT LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT
101: HAIKLPCAWV MTCAFSPNGQ SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT CILWDVTTGL KTSVFGGEFQ
201: SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301: AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS WDSNLKIWAF GGHRRVI
Arabidopsis Description
GB1ELK4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0Y1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.