Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | |
| GSMUA_Achr8P07200_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34460.1 | GSMUA_Achr8P07200_001 | AT4G05420.1 | 18223036 |
| AT4G34460.1 | GSMUA_Achr11P... | AT5G10920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P09850_001 | Banana | cytosol | 92.61 | 92.61 |
| GSMUA_Achr10P... | Banana | cytosol | 86.54 | 86.54 |
| Os03t0669200-01 | Rice | plasma membrane | 86.28 | 86.05 |
| EER93689 | Sorghum | cytosol, plastid | 85.75 | 85.53 |
| Zm00001d033422_P001 | Maize | extracellular, mitochondrion, plasma membrane | 85.22 | 85.0 |
| TraesCS4A01G294000.1 | Wheat | cytosol, plastid | 85.22 | 85.0 |
| TraesCS4D01G017800.1 | Wheat | cytosol, plastid | 84.96 | 84.74 |
| TraesCS4B01G019900.1 | Wheat | cytosol, plastid | 84.96 | 84.74 |
| VIT_03s0063g02480.t01 | Wine grape | cytosol | 81.27 | 81.7 |
| KRH60850 | Soybean | cytosol | 80.21 | 80.64 |
| PGSC0003DMT400001906 | Potato | cytosol | 79.95 | 80.37 |
| Solyc01g109560.2.1 | Tomato | cytosol | 79.68 | 80.11 |
| KRH51535 | Soybean | cytosol | 79.16 | 79.58 |
| KRH24483 | Soybean | cytosol | 77.57 | 77.98 |
| KRH29472 | Soybean | cytosol | 77.57 | 77.98 |
| AT4G34460.1 | Thale cress | cytosol | 77.31 | 77.72 |
| Bra011536.1-P | Field mustard | cytosol | 76.78 | 77.19 |
| CDX75436 | Canola | cytosol | 76.78 | 77.19 |
| CDX69061 | Canola | cytosol | 76.78 | 77.19 |
| Bra034628.1-P | Field mustard | cytosol | 75.46 | 75.66 |
| Bra017658.1-P | Field mustard | cytosol | 75.46 | 75.66 |
| CDY46247 | Canola | cytosol | 69.13 | 75.29 |
| CDX76284 | Canola | cytosol | 68.07 | 75.0 |
| HORVU4Hr1G003110.2 | Barley | cytosol | 85.75 | 73.03 |
| CDX72483 | Canola | vacuole | 75.99 | 32.54 |
| CDY45313 | Canola | endoplasmic reticulum, extracellular, vacuole | 75.73 | 32.17 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:26.8.1.1.2.2 | MapMan:27.6.2.2 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr6G31660_001 | EnsemblPlants:GSMUA_Achr6P31660_001 | EnsemblPlants:GSMUA_Achr6T31660_001 | InterPro:Gprotein_B | InterPro:Guanine_nucleotide-bd_bsu | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0TBW1 | PFAM:PF00400 | PIRSF:PIRSF002394 | PRINTS:PR00319 |
| PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19850 | PANTHER:PTHR19850:SF48 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000294D515 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
Guanine nucleotide-binding protein subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr6G31660_001]
Coordinates
chr6:+:31383304..31387791
Molecular Weight (calculated)
41405.7 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.228
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVAELKERH IAATATVNSL RERLKQRRQL LLDTDVAAFA KSQGRSAISF NSTDLICCRT LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT
101: HAIKLQCPWV MTCAFAPNGQ SVACGGLDSA CSIFNLNSQV DRDGNIPVSR ILTGHKGYVY SCQYVPDQET RLITSSGDQT CVLWDVTTGQ RISVFGGEFP
201: SGHTADVLSV SINSSNSNMF VSGSCDMTAR LWDTRIASRA VGTYHGHQGD VNTVKFFPDG QRFGTGSDDS TCRLYDMRTG HQLQVYSQQH EGDDNDVPIV
301: TSIAFSISGR LLFAGYSSGD CYVWDTLMAE VVLNLGTSQN SHEARISCLG LSSDGSALCT GSWDKNLKIW AFGGHRKVI
101: HAIKLQCPWV MTCAFAPNGQ SVACGGLDSA CSIFNLNSQV DRDGNIPVSR ILTGHKGYVY SCQYVPDQET RLITSSGDQT CVLWDVTTGQ RISVFGGEFP
201: SGHTADVLSV SINSSNSNMF VSGSCDMTAR LWDTRIASRA VGTYHGHQGD VNTVKFFPDG QRFGTGSDDS TCRLYDMRTG HQLQVYSQQH EGDDNDVPIV
301: TSIAFSISGR LLFAGYSSGD CYVWDTLMAE VVLNLGTSQN SHEARISCLG LSSDGSALCT GSWDKNLKIW AFGGHRKVI
001: MSVSELKERH AVATETVNNL RDQLRQRRLQ LLDTDVARYS AAQGRTRVSF GATDLVCCRT LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT
101: HAIKLPCAWV MTCAFSPNGQ SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT CILWDVTTGL KTSVFGGEFQ
201: SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301: AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS WDSNLKIWAF GGHRRVI
101: HAIKLPCAWV MTCAFSPNGQ SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT CILWDVTTGL KTSVFGGEFQ
201: SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301: AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS WDSNLKIWAF GGHRRVI
Arabidopsis Description
GB1ELK4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.