Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75436 | Canola | cytosol | 94.69 | 94.69 |
| Bra011536.1-P | Field mustard | cytosol | 94.43 | 94.43 |
| CDX69061 | Canola | cytosol | 94.16 | 94.16 |
| Bra017658.1-P | Field mustard | cytosol | 92.84 | 92.59 |
| Bra034628.1-P | Field mustard | cytosol | 90.45 | 90.21 |
| CDX76284 | Canola | cytosol | 81.7 | 89.53 |
| CDY46247 | Canola | cytosol | 82.23 | 89.08 |
| VIT_03s0063g02480.t01 | Wine grape | cytosol | 82.49 | 82.49 |
| PGSC0003DMT400001906 | Potato | cytosol | 81.43 | 81.43 |
| Solyc01g109560.2.1 | Tomato | cytosol | 81.17 | 81.17 |
| KRH29472 | Soybean | cytosol | 80.9 | 80.9 |
| KRH24483 | Soybean | cytosol | 80.64 | 80.64 |
| KRH60850 | Soybean | cytosol | 80.11 | 80.11 |
| KRH51535 | Soybean | cytosol | 79.84 | 79.84 |
| GSMUA_Achr6P31660_001 | Banana | cytosol | 77.72 | 77.31 |
| Os03t0669200-01 | Rice | plasma membrane | 77.19 | 76.58 |
| EER93689 | Sorghum | cytosol, plastid | 77.19 | 76.58 |
| GSMUA_Achr10P... | Banana | cytosol | 76.92 | 76.52 |
| TraesCS4A01G294000.1 | Wheat | cytosol, plastid | 76.92 | 76.32 |
| GSMUA_Achr9P09850_001 | Banana | cytosol | 76.66 | 76.25 |
| TraesCS4D01G017800.1 | Wheat | cytosol, plastid | 76.66 | 76.05 |
| TraesCS4B01G019900.1 | Wheat | cytosol, plastid | 76.66 | 76.05 |
| Zm00001d033422_P001 | Maize | extracellular, mitochondrion, plasma membrane | 76.39 | 75.79 |
| HORVU4Hr1G003110.2 | Barley | cytosol | 76.39 | 64.72 |
| CDX72483 | Canola | vacuole | 93.63 | 39.89 |
| CDY45313 | Canola | endoplasmic reticulum, extracellular, vacuole | 92.84 | 39.24 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:26.8.1.1.2.2 | MapMan:27.6.2.2 | EntrezGene:829597 | UniProt:A0A178V0Y1 | ProteinID:AEE86381.1 |
| Symbol:AGB1 | ArrayExpress:AT4G34460 | EnsemblPlantsGene:AT4G34460 | RefSeq:AT4G34460 | TAIR:AT4G34460 | RefSeq:AT4G34460-TAIR-G |
| EnsemblPlants:AT4G34460.1 | TAIR:AT4G34460.1 | Unigene:At.22855 | ProteinID:CAA18825.1 | ProteinID:CAB80163.1 | ncoils:Coil |
| InterPro:G-protein_beta_WD-40_rep | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005834 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007186 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009738 |
| GO:GO:0009788 | GO:GO:0009791 | GO:GO:0009817 | GO:GO:0009845 | GO:GO:0009867 | GO:GO:0009987 |
| GO:GO:0009991 | GO:GO:0010118 | GO:GO:0010154 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030968 |
| GO:GO:0048364 | GO:GO:0048527 | GO:GO:0050832 | GO:GO:0072593 | GO:GO:0080008 | GO:GO:1905392 |
| GO:GO:2000280 | InterPro:Gprotein_B | InterPro:Guanine_nucleotide-bd_bsu | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| RefSeq:NP_195172.1 | ProteinID:OAO98712.1 | UniProt:P49177 | PFAM:PF00400 | PIRSF:PIRSF002394 | PO:PO:0000013 |
| PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005660 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00319 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19850 | PANTHER:PTHR19850:SF48 | SMART:SM00320 | SUPFAM:SSF50978 |
| EMBL:U12232 | UniParc:UPI000012B21C | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
GB1ELK4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0Y1]
Coordinates
chr4:-:16477031..16479620
Molecular Weight (calculated)
41008.0 Da
IEP (calculated)
7.255
GRAVY (calculated)
-0.225
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVSELKERH AVATETVNNL RDQLRQRRLQ LLDTDVARYS AAQGRTRVSF GATDLVCCRT LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT
101: HAIKLPCAWV MTCAFSPNGQ SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT CILWDVTTGL KTSVFGGEFQ
201: SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301: AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS WDSNLKIWAF GGHRRVI
101: HAIKLPCAWV MTCAFSPNGQ SVACGGLDSV CSIFSLSSTA DKDGTVPVSR MLTGHRGYVS CCQYVPNEDA HLITSSGDQT CILWDVTTGL KTSVFGGEFQ
201: SGHTADVLSV SISGSNPNWF ISGSCDSTAR LWDTRAASRA VRTFHGHEGD VNTVKFFPDG YRFGTGSDDG TCRLYDIRTG HQLQVYQPHG DGENGPVTSI
301: AFSVSGRLLF AGYASNNTCY VWDTLLGEVV LDLGLQQDSH RNRISCLGLS ADGSALCTGS WDSNLKIWAF GGHRRVI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.