Factsheet for GSMUA_Achr11P05170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10920.1	GSMUA_Achr11P...	AT5G10920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g07590.t01	Wine grape	cytosol	78.67	79.5
CDY69492	Canola	cytosol, peroxisome	36.85	74.48
KRH62224	Soybean	plastid	78.67	74.22
KRH52951	Soybean	plastid	78.47	73.45
EER94983	Sorghum	plastid	75.78	70.93
TraesCS4D01G186300.1	Wheat	plastid	75.36	70.54
Solyc04g076320.2.1	Tomato	plastid	76.4	70.29
TraesCS4A01G119700.1	Wheat	plastid	74.74	69.96
PGSC0003DMT400024170	Potato	plastid	77.23	69.07
CDX69799	Canola	plastid	70.39	68.69
CDX97066	Canola	plastid	73.29	68.21
AT5G10920.1	Thale cress	plastid	72.26	67.5
CDY14477	Canola	plastid	61.7	63.81
CDY69491	Canola	cytosol	15.73	50.67
HORVU4Hr1G054060.3	Barley	plastid	71.01	46.48
TraesCS4B01G185000.1	Wheat	plastid	71.01	46.23
Os03t0305500-02	Rice	plastid	71.01	45.67
Zm00001d047667_P001	Maize	plastid	74.95	41.14
Bra009004.1-P	Field mustard	mitochondrion, plastid	73.5	37.77
TraesCS5B01G299700.1	Wheat	plastid	20.91	20.45
TraesCS5D01G307100.1	Wheat	mitochondrion, plastid	20.91	20.45
HORVU5Hr1G078800.2	Barley	plastid	20.29	19.8

Protein Annotations

KEGG:00220+4.3.2.1	KEGG:00250+4.3.2.1	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10	MapMan:4.1.1.1.2.4
InterPro:Arg_succ_lyase_C	InterPro:Argininosuccinate_lyase	InterPro:Fumarase/histidase_N	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam
GO:GO:0003674	GO:GO:0003824	GO:GO:0004056	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0042450	EnsemblPlantsGene:GSMUA_Achr11G05170_001	EnsemblPlants:GSMUA_Achr11P05170_001	EnsemblPlants:GSMUA_Achr11T05170_001
InterPro:IPR024083	InterPro:L-Aspartase-like	UniProt:M0RPJ7	HAMAP:MF_00006	PFAM:PF00206	PFAM:PF14698
PRINTS:PR00145	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR43814	SUPFAM:SSF48557	TIGRFAMs:TIGR00838
UniParc:UPI0002963920	:	:	:	:	:

Description

Argininosuccinate lyase [Source:GMGC_GENE;Acc:GSMUA_Achr11G05170_001]

Coordinates

chr11:-:3866973..3874990

Molecular Weight (calculated)

53834.4 Da

IEP (calculated)

5.006

GRAVY (calculated)

-0.178

Length

483 amino acids

Sequence
(BLAST)

001: MASTQPWTAQ EQEKAKEAKL WGGRFEDSVT DAVERFSESV SFDKALYKQD IMGSRAHARM LAHQGLMTVS DRDSILHGLD EIERRIEAGE FVWRMDREDV
101: HMNIEAALTD IIGEPAKKLH TARSRNDQVV TDLRLWCREA IDKIVASIKQ LQVALIKLGL SNEGLIVPGY THLQRAQPVL LQHLLLSYVE QLERDVGRLV
201: DCKDRMNFCP LGACALAGTG LPIDRFLTSD ALGFTAPMRN SIDAVSDRDF VLEFLSANSI AAVHLSRLGE EWVLWASEEF GFLTPSDSVS TGSSIMPQKK
301: NPDPMELVRG KSARVVGDLM TLLVLCKGLP QAYNRDLQED KEPLFDSVKT VLGMLEVTTE FAQNIAFNHA RIQKVLPAGH LDATTLADYL VNKGLPFRTS
401: HEIVGRCVAL CVSRNCQLSE LPLDQLQGIN SIFKEDVYDF LGVENSVNKF SSYGSTGSEC VAEQLSFWIS KLQIGQTENE KTE

Best Arabidopsis Sequence Match ( AT5G10920.1 )
(BLAST)

001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST

Arabidopsis Description

Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.