Factsheet for HORVU4Hr1G054060.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G054060.3
HORVU5Hr1G078800.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10920.1	HORVU4Hr1G054060.3	AT5G10920.1	21798944
AT5G10920.1	HORVU5Hr1G078800.2	AT5G10920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G185000.1	Wheat	plastid	93.63	93.13
TraesCS4A01G119700.1	Wheat	plastid	59.35	84.88
TraesCS4D01G186300.1	Wheat	plastid	59.35	84.88
EER94983	Sorghum	plastid	55.83	79.84
GSMUA_Achr11P...	Banana	cytosol	46.48	71.01
VIT_18s0001g07590.t01	Wine grape	cytosol	45.39	70.08
KRH62224	Soybean	plastid	45.26	65.23
CDY69492	Canola	cytosol, peroxisome	21.0	64.85
KRH52951	Soybean	plastid	44.99	64.34
Solyc04g076320.2.1	Tomato	plastid	45.53	64.0
CDX69799	Canola	plastid	42.14	62.83
Os03t0305500-02	Rice	plastid	63.82	62.72
CDX97066	Canola	plastid	44.04	62.62
AT5G10920.1	Thale cress	plastid	43.77	62.48
PGSC0003DMT400024170	Potato	plastid	44.85	61.3
CDY14477	Canola	plastid	38.21	60.39
Zm00001d047667_P001	Maize	plastid	63.55	53.3
CDY69491	Canola	cytosol	9.62	47.33
Bra009004.1-P	Field mustard	mitochondrion, plastid	45.66	35.85
HORVU5Hr1G078800.2	Barley	plastid	13.28	19.8

Protein Annotations

KEGG:00220+4.3.2.1	KEGG:00250+4.3.2.1	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10	MapMan:4.1.1.1.2.4
UniProt:A0A287P380	InterPro:Arg_succ_lyase_C	InterPro:Argininosuccinate_lyase	InterPro:Fumarase/histidase_N	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N
InterPro:Fumarate_lyase_fam	GO:GO:0003674	GO:GO:0003824	GO:GO:0004056	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0042450	EnsemblPlantsGene:HORVU4Hr1G054060	EnsemblPlants:HORVU4Hr1G054060.3	InterPro:IPR024083
InterPro:L-Aspartase-like	HAMAP:MF_00006	PFAM:PF00206	PFAM:PF14698	PRINTS:PR00145	PRINTS:PR00149
ScanProsite:PS00163	PANTHER:PTHR43814	SUPFAM:SSF48557	TIGRFAMs:TIGR00838	UniParc:UPI000B47EB1A	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:450149368..450159323

Molecular Weight (calculated)

80994.9 Da

IEP (calculated)

9.180

GRAVY (calculated)

-0.415

Length

738 amino acids

Sequence
(BLAST)

001: MSTTPRGRSS SRRRNRCCKC AGGGGGKPST PCCFNPLRSL FRCPGRGRGR SRSRSHSRNR TAPSRVSADI GTEQQGQEPS FFVYSMGSAA ENKKKKHRKA
101: RLPSIRSCFR SKKKERKASA RCQPLTPAPS MVTHPPRSPP APDNTPAVAS GVTMTQPPSP AFAETGNVNS PATSDGRTAP TGPGKQPSAD SAWAPFPPQR
201: QQPKQQVDGL QIVEAATGER LSAHEAALIE MVESSTDDSA ESSMKSSLEF INEPSPQTPV KRMVADRETA VVKTTAREAP RLWLNGNAAK AGTGARFSEP
301: LVVAEANELW AHDMGSKAHA SMLAAQGLIT TGDRDIILEG LDQIEKQIQD GKFEWRKDRE DVHMNIEAAL IEKVGEPAKK LHTARSRNDQ IVTDLRLWCR
401: DAIDKILIRI KQFQVSLVLL ASKYVDLIVP GYTHLQRAQP VLLPHLLLSY VEQLERDAGR LLDCRERVNF CPLGACALAG TGLPIDRFKT AKDLKFTAPM
501: KNSIDAVSDR DFVLEFLAAN SIAAIHLSRI GEEWVLWASE EFGFLTPSDK VSTGSSIMPQ KKNPDPMELV RGKSARVVGD LMTVLVLCKG LPQAYNRDLQ
601: EDKEPLFDSV KAILGMLEVC SEFAQNISFN SKRIQSSLPA GYLDATTLAD YLVKKGVPFR TSHEIVGRCV ALCVSKNCQL TELEMHDLKA VHPVFEADVY
701: AYLGVENAVN KFISYGSTGS EQVKKQLEDW RLQLGINP

Best Arabidopsis Sequence Match ( AT5G10920.1 )
(BLAST)

001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST

Arabidopsis Description

Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.