CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX69799
CDX97066
CDY14477
CDY69491
CDY69492

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10920.1	CDX69799	AT5G10920.1	21798944
AT5G10920.1	CDX97066	AT5G10920.1	21798944
AT5G10920.1	CDY14477	AT5G10920.1	21798944
AT5G10920.1	CDY69491	AT5G10920.1	21798944
AT5G10920.1	CDY69492	AT5G10920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69799	Canola	plastid	93.45	97.98
AT5G10920.1	Thale cress	plastid	92.1	92.46
CDY69492	Canola	cytosol, peroxisome	40.27	87.45
CDY14477	Canola	plastid	75.14	83.51
CDY69491	Canola	cytosol	23.12	80.0
VIT_18s0001g07590.t01	Wine grape	cytosol	71.29	77.41
GSMUA_Achr11P...	Banana	cytosol	68.21	73.29
Solyc04g076320.2.1	Tomato	plastid	72.64	71.81
KRH62224	Soybean	plastid	70.71	71.68
KRH52951	Soybean	plastid	70.91	71.32
PGSC0003DMT400024170	Potato	plastid	71.68	68.89
TraesCS4D01G186300.1	Wheat	plastid	67.24	67.64
TraesCS4A01G119700.1	Wheat	plastid	67.05	67.44
EER94983	Sorghum	plastid	67.05	67.44
HORVU4Hr1G054060.3	Barley	plastid	62.62	44.04
TraesCS4B01G185000.1	Wheat	plastid	62.04	43.4
Os03t0305500-02	Rice	plastid	62.62	43.28
Zm00001d047667_P001	Maize	plastid	66.86	39.43
TraesCS5B01G299700.1	Wheat	plastid	18.3	19.23
TraesCS5D01G307100.1	Wheat	mitochondrion, plastid	18.11	19.03
HORVU5Hr1G078800.2	Barley	plastid	16.96	17.78

Protein Annotations

KEGG:00220+4.3.2.1	KEGG:00250+4.3.2.1	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10	MapMan:4.1.1.1.2.4
GO:A0A078E795	InterPro:Arg_succ_lyase_C	InterPro:Argininosuccinate_lyase	EnsemblPlants:CDX97066	ProteinID:CDX97066	ProteinID:CDX97066.1
InterPro:Fumarase/histidase_N	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam	GO:GO:0003674	GO:GO:0003824
GO:GO:0004056	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0042450
EnsemblPlantsGene:GSBRNA2T00104042001	InterPro:IPR024083	InterPro:L-Aspartase-like	HAMAP:MF_00006	PFAM:PF00206	PFAM:PF14698
PRINTS:PR00145	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR43814	MetaCyc:PWY-4983	MetaCyc:PWY-4984
MetaCyc:PWY-5	MetaCyc:PWY-5154	MetaCyc:PWY-7400	SUPFAM:SSF48557	TIGRFAMs:TIGR00838	UniPathway:UPA00068
UniParc:UPI0004EEEE1B	SEG:seg	:	:	:	:

Description

BnaC09g45590D

Coordinates

chrLK031897:+:449640..451773

Molecular Weight (calculated)

57761.8 Da

IEP (calculated)

5.532

GRAVY (calculated)

-0.281

Length

519 amino acids

Sequence
(BLAST)

001: MGALDLSLSQ SLLFSPSRSY SPSSTHRSVS FLPPGSKSRS LPPLRSMSSH DDNDTASKET KLWGGRFEES VTEKVEKFTE SISFDKVLYK QDIMGSKAHA
101: TMLAHQGLIT DTDRDSILQG LDEIERKIER DEFEWRTDRE DVHMNIEAAL TDLIGEPAKK LHTARSRNDQ VATDFRLWCR DAIDTVVGKI KNLQTALVQL
201: ALKNEALIVP GYTHLQRAQP VLLPHVLLTY VEQLERDAGR YIDCRGRLNF CPLGACALAG TGLPIDRFMT ATALGFTEPM RNSIDAVSDR DFVLEFLYAN
301: SNTAIHLSRL GEEWVLWASE EFGFMTPSDS VSTGSSIMPQ KKNPDPMELV RGKSARVIGD LVTVLTLCKG LPLAYNRDFQ EDKEPMFDST KTIMGMIDVS
401: AEFAQNVTFN EDRIKRSLPA GHLDATTLAD YLVKKGMPFR SSHDVVGKLV GVCVSRGCEL QNLSLEEMKK LSPVFEEDVF GFLGVENSVN KFSSYGSTGS
501: NCVAEQLGYW VNKLKITST

Best Arabidopsis Sequence Match ( AT5G10920.1 )
(BLAST)

001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST

Arabidopsis Description

Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.