Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d047667_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G10920.1 | Zm00001d047667_P001 | AT5G10920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94983 | Sorghum | plastid | 54.43 | 92.83 |
| TraesCS4D01G186300.1 | Wheat | plastid | 50.68 | 86.43 |
| TraesCS4A01G119700.1 | Wheat | plastid | 50.57 | 86.24 |
| GSMUA_Achr11P... | Banana | cytosol | 41.14 | 74.95 |
| VIT_18s0001g07590.t01 | Wine grape | cytosol | 40.0 | 73.64 |
| CDY69492 | Canola | cytosol, peroxisome | 19.43 | 71.55 |
| KRH62224 | Soybean | plastid | 40.57 | 69.73 |
| KRH52951 | Soybean | plastid | 40.57 | 69.19 |
| Solyc04g076320.2.1 | Tomato | plastid | 40.57 | 68.0 |
| CDX97066 | Canola | plastid | 39.43 | 66.86 |
| CDX69799 | Canola | plastid | 37.5 | 66.67 |
| AT5G10920.1 | Thale cress | plastid | 38.98 | 66.34 |
| PGSC0003DMT400024170 | Potato | plastid | 40.23 | 65.56 |
| TraesCS4B01G185000.1 | Wheat | plastid | 53.75 | 63.75 |
| HORVU4Hr1G054060.3 | Barley | plastid | 53.3 | 63.55 |
| CDY14477 | Canola | plastid | 33.07 | 62.31 |
| Os03t0305500-02 | Rice | plastid | 50.68 | 59.39 |
| CDY69491 | Canola | cytosol | 7.95 | 46.67 |
| Bra009004.1-P | Field mustard | mitochondrion, plastid | 40.91 | 38.3 |
Protein Annotations
| KEGG:00220+4.3.2.1 | KEGG:00250+4.3.2.1 | Gene3D:1.10.275.10 | Gene3D:1.10.275.50 | Gene3D:1.10.40.30 | EntrezGene:100191977 |
| MapMan:4.1.1.1.2.4 | UniProt:A0A1D6PC80 | ProteinID:AQL07235.1 | InterPro:Arg_succ_lyase_C | InterPro:Argininosuccinate_lyase | InterPro:Fumarase/histidase_N |
| InterPro:Fumarate_lyase_CS | InterPro:Fumarate_lyase_N | InterPro:Fumarate_lyase_fam | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004056 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0042450 |
| InterPro:IPR024083 | InterPro:L-Aspartase-like | HAMAP:MF_00006 | PFAM:PF00206 | PFAM:PF14698 | PRINTS:PR00145 |
| PRINTS:PR00149 | ScanProsite:PS00163 | SUPFAM:SSF48557 | UniParc:UPI0008434C35 | EnsemblPlantsGene:Zm00001d047667 | EnsemblPlants:Zm00001d047667_P001 |
| EnsemblPlants:Zm00001d047667_T001 | SEG:seg | : | : | : | : |
Description
Argininosuccinate lyase chloroplastic
Coordinates
chr9:+:138649979..138656692
Molecular Weight (calculated)
97458.5 Da
IEP (calculated)
9.703
GRAVY (calculated)
-0.458
Length
880 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAAMSTTPR ARGRKSHRRA RCRCLGGNKE DRATPCCSFN PLRPLFRCPR RHRSRSRSRS RSKHRQRTPS KVRDAPVAAG AQQQAQEDEP SFFAYAMPNQ
101: SGFGATDKHK KNKKYRKPRM PSFGSCFRRR KKERGQAKAA AATVSAPRPA LTPISSLLTH TPGSPASEKL QAATTPSVTQ PPSPVHTENG STAVNSPAPT
201: GRQPASARPA KHSTDSMWSP FAPEMQQQQP KQVEVVDVET GDRLSTHELG LIEMLGSSTD NSAESSAKSS LDNVNEPPLP PAKRTVLERD AEAVPMMKIK
301: EDNRQNPPSQ HLLRRRAAAS NNGERTPMAF TSQSLIFRAP ASPSCARITP SSGRVTLRDR SAVFPLVAAA STSMASSESE DKRETKLWGG RFEEGVTDAV
401: ERFTESISYD WQLYKYDIMG SKAHASMLAG QGLITATDRD IILEGLDQIE RLIQEGKFEW RKDREDVHMN IEAALIERVG EPAKKLHTAR SRNDQIVTDL
501: RLWCRDAIDR ILIRIKQLQV SLVILASKYV DLIVPGYTHL QRAQPVLLPH LLLSYVEQLE RDAGRLVNCR ERMNFCPLGA CALAGTGLPI DRFQTAKDLK
601: FTAPMKNSYS ASAGMGYLDM QAHMKSVIYL TLYFQALRFG GAKGIIDAVS DRDFVLEFLA ANSIAAVHLS RIGEEWVLWA SEEFGFLIPS DKVSTGSSIM
701: PQKKNPDPME LVRGKSARVV GDLMTVLTLC KGLPQAYNRD LQEDKEPLFD SVKAVLGMLE VCTEFAQNIS FNSKRIQSSL PAGYLDATTL ADYLVKKGVP
801: FRTSHEIVGR SVALCVSKNC QLAELELADL KSVHPVFEDD VYEYLGVENA VNKFISYGST GSEQVKKQLE DWRIQLGVSS
101: SGFGATDKHK KNKKYRKPRM PSFGSCFRRR KKERGQAKAA AATVSAPRPA LTPISSLLTH TPGSPASEKL QAATTPSVTQ PPSPVHTENG STAVNSPAPT
201: GRQPASARPA KHSTDSMWSP FAPEMQQQQP KQVEVVDVET GDRLSTHELG LIEMLGSSTD NSAESSAKSS LDNVNEPPLP PAKRTVLERD AEAVPMMKIK
301: EDNRQNPPSQ HLLRRRAAAS NNGERTPMAF TSQSLIFRAP ASPSCARITP SSGRVTLRDR SAVFPLVAAA STSMASSESE DKRETKLWGG RFEEGVTDAV
401: ERFTESISYD WQLYKYDIMG SKAHASMLAG QGLITATDRD IILEGLDQIE RLIQEGKFEW RKDREDVHMN IEAALIERVG EPAKKLHTAR SRNDQIVTDL
501: RLWCRDAIDR ILIRIKQLQV SLVILASKYV DLIVPGYTHL QRAQPVLLPH LLLSYVEQLE RDAGRLVNCR ERMNFCPLGA CALAGTGLPI DRFQTAKDLK
601: FTAPMKNSYS ASAGMGYLDM QAHMKSVIYL TLYFQALRFG GAKGIIDAVS DRDFVLEFLA ANSIAAVHLS RIGEEWVLWA SEEFGFLIPS DKVSTGSSIM
701: PQKKNPDPME LVRGKSARVV GDLMTVLTLC KGLPQAYNRD LQEDKEPLFD SVKAVLGMLE VCTEFAQNIS FNSKRIQSSL PAGYLDATTL ADYLVKKGVP
801: FRTSHEIVGR SVALCVSKNC QLAELELADL KSVHPVFEDD VYEYLGVENA VNKFISYGST GSEQVKKQLE DWRIQLGVSS
001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST
Arabidopsis Description
Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.