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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97066 Canola plastid 97.98 93.45
AT5G10920.1 Thale cress plastid 91.52 87.62
CDY69492 Canola cytosol, peroxisome 40.61 84.1
CDY69491 Canola cytosol 24.44 80.67
CDY14477 Canola plastid 74.14 78.59
VIT_18s0001g07590.t01 Wine grape cytosol 71.31 73.85
GSMUA_Achr11P... Banana cytosol 68.69 70.39
KRH62224 Soybean plastid 71.11 68.75
Solyc04g076320.2.1 Tomato plastid 72.53 68.38
KRH52951 Soybean plastid 71.11 68.22
PGSC0003DMT400024170 Potato plastid 71.92 65.93
TraesCS4D01G186300.1 Wheat plastid 67.68 64.92
TraesCS4A01G119700.1 Wheat plastid 67.47 64.73
EER94983 Sorghum plastid 67.07 64.34
Bra009004.1-P Field mustard mitochondrion, plastid 94.34 49.68
HORVU4Hr1G054060.3 Barley plastid 62.83 42.14
TraesCS4B01G185000.1 Wheat plastid 62.22 41.51
Os03t0305500-02 Rice plastid 62.42 41.15
Zm00001d047667_P001 Maize plastid 66.67 37.5
TraesCS5D01G307100.1 Wheat mitochondrion, plastid 17.17 17.21
TraesCS5B01G299700.1 Wheat plastid 16.97 17.0
HORVU5Hr1G078800.2 Barley plastid 15.96 15.96
Protein Annotations
KEGG:00220+4.3.2.1KEGG:00250+4.3.2.1Gene3D:1.10.275.50Gene3D:1.10.40.30Gene3D:1.20.200.10MapMan:4.1.1.1.2.4
GO:A0A078C0W0InterPro:Arg_succ_lyase_CInterPro:Argininosuccinate_lyaseEnsemblPlants:CDX69799ProteinID:CDX69799ProteinID:CDX69799.1
InterPro:Fumarate_lyase_CSInterPro:Fumarate_lyase_NInterPro:Fumarate_lyase_famGO:GO:0003674GO:GO:0003824GO:GO:0004056
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0042450EnsemblPlantsGene:GSBRNA2T00135851001
InterPro:L-Aspartase-likeHAMAP:MF_00006PFAM:PF00206PFAM:PF14698PRINTS:PR00145PRINTS:PR00149
ScanProsite:PS00163PANTHER:PTHR43814MetaCyc:PWY-4983MetaCyc:PWY-4984MetaCyc:PWY-5MetaCyc:PWY-5154
MetaCyc:PWY-7400SUPFAM:SSF48557TIGRFAMs:TIGR00838UniPathway:UPA00068UniParc:UPI0004EF48FDSEG:seg
Description
BnaA10g21480D
Coordinates
chrLK031790:-:1896135..1898265
Molecular Weight (calculated)
55015.6 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.310
Length
495 amino acids
Sequence
(BLAST)
001: MGALDLSLSQ SLLFSPSRSY PPSSTPRSVS FLPPGSKSRS LPPLRSMSSH DDNDTASKET KLWGGRFEES VTEKVEKFTE SISFDKVLYK QDIMGSKAHA
101: TMLAHQGLMT DSDRDSILQG LDEIERKIER DEFEWRTDRE DVHMNIEAAL TDLIGEPAKK LHTARSRNDQ TALVQLALKN EGLIVPGYTH LQRAQPVLLP
201: HVLLTYVEQL ERDAGRYIDC RERLNVCPLG ACALAGTGLP IDRFMTASAL GFTEPMRNSI DAVSDRDFVL EFLYANSNTA IHLSRLGEEW VLWASEEFGF
301: MTPSDSVSTG SSIMPQKKNP DPMELVRGKS ARVIGDLVTV LTLCKGLPLA YNRDFQEDKE PMFDSTKTIM GMIDVSAEFA QNVTFNEERI KRSLPAGHLD
401: ATTLADYLVK KGMPFRSSHD VVGKLVGVCV SRGCELQNLS LEEMKKLSPV FEEDVFGFLG VENSVNKFSS YGSTGSNCVA EQLGYWVKKL KITST
Best Arabidopsis Sequence Match ( AT5G10920.1 )
(BLAST)
001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST
Arabidopsis Description
Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.