Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G10920.1 | CDX69799 | AT5G10920.1 | 21798944 |
AT5G10920.1 | CDX97066 | AT5G10920.1 | 21798944 |
AT5G10920.1 | CDY14477 | AT5G10920.1 | 21798944 |
AT5G10920.1 | CDY69491 | AT5G10920.1 | 21798944 |
AT5G10920.1 | CDY69492 | AT5G10920.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX97066 | Canola | plastid | 97.98 | 93.45 |
AT5G10920.1 | Thale cress | plastid | 91.52 | 87.62 |
CDY69492 | Canola | cytosol, peroxisome | 40.61 | 84.1 |
CDY69491 | Canola | cytosol | 24.44 | 80.67 |
CDY14477 | Canola | plastid | 74.14 | 78.59 |
VIT_18s0001g07590.t01 | Wine grape | cytosol | 71.31 | 73.85 |
GSMUA_Achr11P... | Banana | cytosol | 68.69 | 70.39 |
KRH62224 | Soybean | plastid | 71.11 | 68.75 |
Solyc04g076320.2.1 | Tomato | plastid | 72.53 | 68.38 |
KRH52951 | Soybean | plastid | 71.11 | 68.22 |
PGSC0003DMT400024170 | Potato | plastid | 71.92 | 65.93 |
TraesCS4D01G186300.1 | Wheat | plastid | 67.68 | 64.92 |
TraesCS4A01G119700.1 | Wheat | plastid | 67.47 | 64.73 |
EER94983 | Sorghum | plastid | 67.07 | 64.34 |
Bra009004.1-P | Field mustard | mitochondrion, plastid | 94.34 | 49.68 |
HORVU4Hr1G054060.3 | Barley | plastid | 62.83 | 42.14 |
TraesCS4B01G185000.1 | Wheat | plastid | 62.22 | 41.51 |
Os03t0305500-02 | Rice | plastid | 62.42 | 41.15 |
Zm00001d047667_P001 | Maize | plastid | 66.67 | 37.5 |
TraesCS5D01G307100.1 | Wheat | mitochondrion, plastid | 17.17 | 17.21 |
TraesCS5B01G299700.1 | Wheat | plastid | 16.97 | 17.0 |
HORVU5Hr1G078800.2 | Barley | plastid | 15.96 | 15.96 |
Protein Annotations
KEGG:00220+4.3.2.1 | KEGG:00250+4.3.2.1 | Gene3D:1.10.275.50 | Gene3D:1.10.40.30 | Gene3D:1.20.200.10 | MapMan:4.1.1.1.2.4 |
GO:A0A078C0W0 | InterPro:Arg_succ_lyase_C | InterPro:Argininosuccinate_lyase | EnsemblPlants:CDX69799 | ProteinID:CDX69799 | ProteinID:CDX69799.1 |
InterPro:Fumarate_lyase_CS | InterPro:Fumarate_lyase_N | InterPro:Fumarate_lyase_fam | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004056 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042450 | EnsemblPlantsGene:GSBRNA2T00135851001 |
InterPro:L-Aspartase-like | HAMAP:MF_00006 | PFAM:PF00206 | PFAM:PF14698 | PRINTS:PR00145 | PRINTS:PR00149 |
ScanProsite:PS00163 | PANTHER:PTHR43814 | MetaCyc:PWY-4983 | MetaCyc:PWY-4984 | MetaCyc:PWY-5 | MetaCyc:PWY-5154 |
MetaCyc:PWY-7400 | SUPFAM:SSF48557 | TIGRFAMs:TIGR00838 | UniPathway:UPA00068 | UniParc:UPI0004EF48FD | SEG:seg |
Description
BnaA10g21480D
Coordinates
chrLK031790:-:1896135..1898265
Molecular Weight (calculated)
55015.6 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.310
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALDLSLSQ SLLFSPSRSY PPSSTPRSVS FLPPGSKSRS LPPLRSMSSH DDNDTASKET KLWGGRFEES VTEKVEKFTE SISFDKVLYK QDIMGSKAHA
101: TMLAHQGLMT DSDRDSILQG LDEIERKIER DEFEWRTDRE DVHMNIEAAL TDLIGEPAKK LHTARSRNDQ TALVQLALKN EGLIVPGYTH LQRAQPVLLP
201: HVLLTYVEQL ERDAGRYIDC RERLNVCPLG ACALAGTGLP IDRFMTASAL GFTEPMRNSI DAVSDRDFVL EFLYANSNTA IHLSRLGEEW VLWASEEFGF
301: MTPSDSVSTG SSIMPQKKNP DPMELVRGKS ARVIGDLVTV LTLCKGLPLA YNRDFQEDKE PMFDSTKTIM GMIDVSAEFA QNVTFNEERI KRSLPAGHLD
401: ATTLADYLVK KGMPFRSSHD VVGKLVGVCV SRGCELQNLS LEEMKKLSPV FEEDVFGFLG VENSVNKFSS YGSTGSNCVA EQLGYWVKKL KITST
101: TMLAHQGLMT DSDRDSILQG LDEIERKIER DEFEWRTDRE DVHMNIEAAL TDLIGEPAKK LHTARSRNDQ TALVQLALKN EGLIVPGYTH LQRAQPVLLP
201: HVLLTYVEQL ERDAGRYIDC RERLNVCPLG ACALAGTGLP IDRFMTASAL GFTEPMRNSI DAVSDRDFVL EFLYANSNTA IHLSRLGEEW VLWASEEFGF
301: MTPSDSVSTG SSIMPQKKNP DPMELVRGKS ARVIGDLVTV LTLCKGLPLA YNRDFQEDKE PMFDSTKTIM GMIDVSAEFA QNVTFNEERI KRSLPAGHLD
401: ATTLADYLVK KGMPFRSSHD VVGKLVGVCV SRGCELQNLS LEEMKKLSPV FEEDVFGFLG VENSVNKFSS YGSTGSNCVA EQLGYWVKKL KITST
001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST
Arabidopsis Description
Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.