Factsheet for HORVU5Hr1G078800.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G054060.3
HORVU5Hr1G078800.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10920.1	HORVU4Hr1G054060.3	AT5G10920.1	21798944
AT5G10920.1	HORVU5Hr1G078800.2	AT5G10920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G299700.1	Wheat	plastid	63.84	63.97
TraesCS5D01G307100.1	Wheat	mitochondrion, plastid	36.77	36.84
VIT_18s0001g07590.t01	Wine grape	cytosol	19.8	20.5
GSMUA_Achr11P...	Banana	cytosol	19.8	20.29
CDY69492	Canola	cytosol, peroxisome	9.49	19.67
KRH52951	Soybean	plastid	19.19	18.41
KRH62224	Soybean	plastid	18.99	18.36
Solyc04g076320.2.1	Tomato	plastid	19.19	18.1
PGSC0003DMT400024170	Potato	plastid	18.99	17.41
CDX97066	Canola	plastid	17.78	16.96
AT5G10920.1	Thale cress	plastid	17.58	16.83
CDX69799	Canola	plastid	15.96	15.96
CDY14477	Canola	plastid	13.74	14.56
HORVU4Hr1G054060.3	Barley	plastid	19.8	13.28
CDY69491	Canola	cytosol	3.84	12.67
Bra009004.1-P	Field mustard	mitochondrion, plastid	18.79	9.89

Protein Annotations

EnsemblPlants:HORVU5Hr1G078800.2	EnsemblPlantsGene:HORVU5Hr1G078800	Gene3D:1.10.275.50	GO:GO:0003674	GO:GO:0003824	GO:GO:0004056
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0042450	InterPro:Argininosuccinate_lyase
InterPro:L-Aspartase-like	KEGG:00220+4.3.2.1	KEGG:00250+4.3.2.1	PANTHER:PTHR43814	SUPFAM:SSF48557	UniParc:UPI000B45FDFF
UniProt:A0A287RXN4	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:555778424..555785806

Molecular Weight (calculated)

56234.5 Da

IEP (calculated)

7.374

GRAVY (calculated)

-0.360

Length

495 amino acids

Sequence
(BLAST)

001: MAAFTAKGSL RGYCFTAAGL SRQNPPPKNS LCDHLVPSRS SAVPAMAWSM GCDTRQVKLK AQVPKWVLPN DDYLYDDHAL QIDTIGSTSP DVYIDLLNLT
101: RYRDPVLGRT KPELTYQHKR RLEVDEKRSR DLVDGLVEYI SSDRENYRYA IMSIKENANM ITEEGFISSY ARDEILEGLE RIEKDFEEGK FYWRNNKDIR
201: SNIVEALIDI VEGPAKRLDA VISRYAQMLT FLQIWCHDSI DKFIAQINEL QVELVLLAIR NEGLVLPCIA RNAKCILLGD LVLSKVEQLE NDVSRLVSCK
301: NKMGSTVQTS FPSGCTNDSM NSLSKGDLHH ICNSILEFGN LIIGDIAHDV KDLERDLHSW MLLLTKNDEV NESLLLMLRH KIDLDIYNVR KSYGSIYNAD
401: ADSSKRFLKA YKVVPQMIRA AREFVKHTCF NHEKIQSLPP RHFLGAPKLA GFRAAKDLEQ GAGAAPKQDF KFHSDHTAGK LLDWLRRLHQ SGEKS

Best Arabidopsis Sequence Match ( AT5G10920.1 )
(BLAST)

001: MGAIDLSFSQ SLLFSSSRSN LSSSTHRSVS FLPPGSKSRC LPPLRSMSHD DDTASKEVKL WGGRFEESVT EKVEKFTESI SFDKVLYKQD IMGSKAHASM
101: LAHQGLITDS DKDSILRGLD DIERQIEANK FEWRTDREDV HMNIEAALTD LIGEPAKKLH TARSRNDQVA TDFRLWCRDA IDTIIVKIRN LQRALVELAL
201: KNEALIVPGY THLQRAQPVL LPHVLLTFVE QLERDAGRYV DCRARLNFSP LGACALAGTG LPIDRFMTAN ALGFTEPMRN SIDAVSDRDF VLEFLYTNAN
301: TGIHLSRLGE EWVLWASEEF GFMTPSDSVS TGSSIMPQKK NPDPMELVRG KSARVIGDLV TVLTLCKGLP LAYNRDFQED KEPMFDSTKT IMGMIDVSAE
401: FAQNVTFNED RIKKSLPAGH LDATTLADYL VKKGMPFRSS HDIVGKLVGV CVSKGCELQN LSLEEMKKLS PVFEEDVFGF LGVENSVNKF SSYGSTGSNC
501: VAEQLGYWVN KLNITST

Arabidopsis Description

Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.