Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 61.73 | 60.48 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 45.88 | 58.38 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 41.56 | 57.71 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 60.49 | 56.11 |
| CDX97845 | Canola | nucleus | 26.75 | 53.94 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 52.67 | 53.78 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 58.85 | 53.76 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 58.64 | 53.27 |
| GSMUA_Achr10P... | Banana | nucleus | 53.91 | 51.37 |
| PGSC0003DMT400056725 | Potato | nucleus | 51.85 | 50.81 |
| Solyc02g032950.2.1 | Tomato | nucleus | 52.06 | 50.8 |
| CDX82900 | Canola | nucleus | 53.91 | 50.29 |
| PGSC0003DMT400042400 | Potato | nucleus | 56.58 | 49.73 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 49.79 | 49.59 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 9.88 | 49.48 |
| KRH36485 | Soybean | nucleus | 54.53 | 48.98 |
| Solyc02g080890.2.1 | Tomato | nucleus | 55.35 | 48.91 |
| AT4G22070.1 | Thale cress | nucleus | 53.7 | 48.51 |
| Bra013584.1-P | Field mustard | nucleus | 53.5 | 48.33 |
| CDX90863 | Canola | nucleus | 50.0 | 47.93 |
| PGSC0003DMT400038852 | Potato | nucleus | 54.73 | 47.76 |
| CDY21301 | Canola | nucleus | 49.79 | 47.73 |
| AT4G04450.1 | Thale cress | nucleus | 51.85 | 47.73 |
| VIT_12s0059g00880.t01 | Wine grape | nucleus | 58.23 | 47.72 |
| CDX94553 | Canola | nucleus | 48.15 | 47.66 |
| KRH02033 | Soybean | nucleus | 47.74 | 47.44 |
| Bra000793.1-P | Field mustard | nucleus | 50.62 | 47.4 |
| KRH11472 | Soybean | nucleus | 54.32 | 47.4 |
| CDY16669 | Canola | nucleus | 47.74 | 47.15 |
| KRH51128 | Soybean | nucleus, plastid | 50.0 | 47.0 |
| Bra029491.1-P | Field mustard | nucleus | 46.71 | 46.14 |
| AT1G62300.1 | Thale cress | nucleus | 51.44 | 45.21 |
| CDY12937 | Canola | nucleus | 51.23 | 45.11 |
| Bra027057.1-P | Field mustard | nucleus | 51.03 | 44.93 |
| CDY19535 | Canola | nucleus | 51.03 | 44.93 |
| GSMUA_Achr2P18390_001 | Banana | nucleus | 32.51 | 43.05 |
| Bra034482.1-P | Field mustard | nucleus | 44.24 | 42.41 |
| Solyc07g051840.2.1 | Tomato | nucleus | 54.94 | 42.31 |
| CDY08634 | Canola | nucleus | 43.42 | 41.95 |
| CDY24892 | Canola | nucleus | 45.06 | 41.79 |
| KRH22585 | Soybean | nucleus | 51.85 | 41.04 |
| KRH25355 | Soybean | nucleus | 51.85 | 41.04 |
| GSMUA_Achr11P... | Banana | nucleus | 34.77 | 40.33 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 46.5 | 39.3 |
| KRH56160 | Soybean | nucleus | 49.79 | 38.53 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 45.68 | 38.28 |
| Zm00001d039245_P001 | Maize | nucleus | 42.59 | 38.26 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 15.02 | 38.02 |
| EES02155 | Sorghum | nucleus | 44.44 | 37.89 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 46.09 | 35.61 |
| TraesCS3D01G173300.2 | Wheat | plastid | 46.3 | 35.38 |
| GSMUA_Achr7P08850_001 | Banana | nucleus | 27.98 | 35.05 |
| GSMUA_Achr10P... | Banana | nucleus | 16.46 | 34.48 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 27.16 | 32.92 |
| GSMUA_Achr10P... | Banana | nucleus | 25.51 | 32.89 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 12.55 | 32.11 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 20.99 | 31.29 |
| GSMUA_Achr11P... | Banana | nucleus | 15.64 | 31.02 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 13.99 | 30.49 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 14.61 | 30.21 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 17.08 | 29.64 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 17.08 | 28.72 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 22.22 | 28.2 |
| GSMUA_Achr10P... | Banana | nucleus | 16.67 | 28.12 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 15.64 | 27.64 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 20.58 | 27.1 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 24.9 | 26.95 |
| GSMUA_Achr10P... | Banana | nucleus | 24.9 | 25.26 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 17.28 | 25.07 |
| Os01t0246700-01 | Rice | nucleus | 19.96 | 23.49 |
| GSMUA_Achr5P09730_001 | Banana | nucleus | 23.66 | 16.15 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr5G16750_001 | EnsemblPlants:GSMUA_Achr5P16750_001 | EnsemblPlants:GSMUA_Achr5T16750_001 | InterPro:IPR003657 |
| InterPro:IPR036576 | UniProt:M0SZ54 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0002965BB7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
WRKY transcription factor 6 [Source:GMGC_GENE;Acc:GSMUA_Achr5G16750_001]
Coordinates
chr5:-:15225031..15227232
Molecular Weight (calculated)
52095.1 Da
IEP (calculated)
7.031
GRAVY (calculated)
-0.482
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGHQYSGV QFKDATAAQA STSPRENRVV VGEMDFFSKE KNTMASVELD LKVPSLGIKS EDLTVNTGLH LANTRSDQSM VDDGMSPHED DKEGKSELVA
101: MQAELERTKE ENQKLRAMLN QVTSNYNALQ MHLVALVQQR RASGNPQGHD IEAKSSNKHE GIVVPRQFMD LGPGGDIDEP SHSSTASRDR SLSLRSHTAK
201: YTREDSSDNG WSPDKASKLT ASKATEQAQD ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMATG CPVRKQVQRC ADDRSILITT
301: YEGAHNHPLP PAAMAMASTT SAAASMLLSG SMPSGDGLMS SNFLARTILP CSSSMATISA SAPFPTVTLD LTQSPNPLQF QRSAASHFQL PFASAAPGLA
401: TSLSPPQVFG QTLQTQSKFS GLQSAATAAI TADPNFTAAL AAAITSIIGG GGNHQTGNNN NSHSISLLHI DISSKIEIDD EDKLAF
101: MQAELERTKE ENQKLRAMLN QVTSNYNALQ MHLVALVQQR RASGNPQGHD IEAKSSNKHE GIVVPRQFMD LGPGGDIDEP SHSSTASRDR SLSLRSHTAK
201: YTREDSSDNG WSPDKASKLT ASKATEQAQD ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMATG CPVRKQVQRC ADDRSILITT
301: YEGAHNHPLP PAAMAMASTT SAAASMLLSG SMPSGDGLMS SNFLARTILP CSSSMATISA SAPFPTVTLD LTQSPNPLQF QRSAASHFQL PFASAAPGLA
401: TSLSPPQVFG QTLQTQSKFS GLQSAATAAI TADPNFTAAL AAAITSIIGG GGNHQTGNNN NSHSISLLHI DISSKIEIDD EDKLAF
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.