Factsheet for GSMUA_Achr11P08290_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P10080_001
GSMUA_Achr1P16990_001
GSMUA_Achr2P05100_001
GSMUA_Achr2P08200_001
GSMUA_Achr3P13440_001
GSMUA_Achr3P22420_001
GSMUA_Achr3P28040_001
GSMUA_Achr4P01930_001
GSMUA_Achr4P05970_001
GSMUA_Achr4P05990_001
GSMUA_Achr4P06000_001
GSMUA_Achr4P12750_001
GSMUA_Achr5P16460_001
GSMUA_Achr6P22990_001
GSMUA_Achr7P05200_001
GSMUA_Achr7P16090_001
GSMUA_Achr7P19340_001
GSMUA_Achr8P08040_001
GSMUA_Achr9P22750_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80840.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr1P10080_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr2P05100_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr3P13440_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr4P01930_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr5P16460_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P05200_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P16090_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P19340_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr6P22990_001	AT3G27420.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr1P16990_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr2P08200_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr3P22420_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr8P08040_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_AchrUn_...	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr3P28040_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P05970_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P05990_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P06000_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P12750_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr9P22750_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_AchrUn_...	AT5G57870.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G71230.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05100_001	Banana	nucleus	46.12	59.47
GSMUA_Achr10P...	Banana	nucleus	65.71	55.9
GSMUA_Achr7P19340_001	Banana	nucleus	42.45	54.17
GSMUA_Achr1P10080_001	Banana	nucleus	71.02	51.94
GSMUA_Achr7P05200_001	Banana	nucleus	53.47	46.79
GSMUA_Achr5P16460_001	Banana	nucleus	44.49	46.38
GSMUA_Achr3P13440_001	Banana	nucleus	51.02	45.45
Bra019123.1-P	Field mustard	nucleus	35.51	44.85
GSMUA_Achr10P...	Banana	nucleus	42.45	44.83
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	37.96	41.7
Solyc12g042590.1.1	Tomato	nucleus	35.51	40.28
PGSC0003DMT400019058	Potato	nucleus	42.86	40.23
PGSC0003DMT400073710	Potato	nucleus	35.51	40.09
PGSC0003DMT400019061	Potato	nucleus	41.22	39.92
CDY22299	Canola	nucleus	46.53	39.31
CDY67287	Canola	nucleus	46.53	39.31
Bra008435.1-P	Field mustard	nucleus	46.53	39.31
KRH47344	Soybean	nucleus	49.8	39.23
Solyc08g067340.2.1	Tomato	nucleus	40.41	39.13
Solyc08g067360.2.1	Tomato	nucleus	40.82	38.76
KRH44560	Soybean	nucleus	49.39	38.66
KRH61669	Soybean	nucleus	34.29	38.18
VIT_09s0018g00240.t01	Wine grape	nucleus	48.16	37.94
CDX88573	Canola	nucleus	46.53	37.87
KRH23643	Soybean	nucleus	47.76	37.86
AT1G80840.1	Thale cress	nucleus	46.53	37.75
CDX67971	Canola	nucleus	45.31	37.37
Bra003588.1-P	Field mustard	nucleus	45.31	37.37
Bra035148.1-P	Field mustard	nucleus	45.71	37.33
CDX87347	Canola	nucleus	45.71	37.33
CDX79347	Canola	nucleus	45.31	37.25
CDX72327	Canola	nucleus	43.27	37.19
CDX75196	Canola	nucleus	42.45	36.75
AT2G25000.1	Thale cress	nucleus	40.0	36.16
KRH09652	Soybean	nucleus	48.16	35.76
KRH15674	Soybean	nucleus	40.41	35.11
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	41.22	34.95
VIT_04s0008g05760.t01	Wine grape	nucleus	44.9	34.7
CDY39879	Canola	nucleus	43.27	34.53
AT4G31800.1	Thale cress	nucleus	43.67	34.52
Bra010220.1-P	Field mustard	nucleus	43.27	34.42
Bra011299.1-P	Field mustard	nucleus	42.45	32.81
CDX68787	Canola	nucleus	42.45	32.6
Solyc03g116890.2.1	Tomato	nucleus	46.53	32.57
PGSC0003DMT400051047	Potato	nucleus	46.53	32.11
KRH05350	Soybean	nucleus	40.82	32.05
KRH52329	Soybean	nucleus	39.18	31.07
Solyc06g068460.2.1	Tomato	nucleus	44.9	30.56
PGSC0003DMT400073396	Potato	nucleus	44.9	30.56
Bra023983.1-P	Field mustard	nucleus	42.45	30.14
CDY70096	Canola	nucleus	42.45	30.14
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	11.02	27.84
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	30.2	21.14
GSMUA_Achr3P03090_001	Banana	nucleus	29.39	18.85
GSMUA_Achr11P...	Banana	nucleus	31.02	18.14
GSMUA_Achr1P05240_001	Banana	nucleus	23.67	17.79
GSMUA_Achr10P...	Banana	nucleus	27.35	17.77
GSMUA_Achr7P08850_001	Banana	nucleus	27.76	17.53
GSMUA_Achr7P13400_001	Banana	nucleus	27.35	16.71
GSMUA_Achr2P18390_001	Banana	nucleus	24.49	16.35
GSMUA_Achr3P20290_001	Banana	nucleus	24.9	15.93
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	31.43	15.78
GSMUA_Achr5P16750_001	Banana	nucleus	31.02	15.64
GSMUA_Achr6P05880_001	Banana	nucleus	30.2	15.55
GSMUA_Achr10P...	Banana	nucleus	31.43	15.52
GSMUA_Achr7P18820_001	Banana	nucleus	28.16	15.37
GSMUA_Achr6P02330_001	Banana	nucleus	22.86	15.18
GSMUA_Achr10P...	Banana	nucleus	31.43	15.1
GSMUA_Achr6P13630_001	Banana	nucleus	31.84	14.89
GSMUA_Achr2P15200_001	Banana	nucleus	31.84	14.66
GSMUA_Achr10P...	Banana	nucleus	28.16	14.4
GSMUA_Achr5P09730_001	Banana	nucleus	21.22	7.3

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr11G08290_001	EnsemblPlants:GSMUA_Achr11P08290_001	EnsemblPlants:GSMUA_Achr11T08290_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0RQF9	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF3
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000296AF30	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 40 [Source:GMGC_GENE;Acc:GSMUA_Achr11G08290_001]

Coordinates

chr11:+:6421726..6423033

Molecular Weight (calculated)

27025.7 Da

IEP (calculated)

8.599

GRAVY (calculated)

-0.845

Length

245 amino acids

Sequence
(BLAST)

001: MDLTSSVDLD LTIGSLRFDG EKLSVEENKK EALEAELGRA NEENKRLKEM LSDMAASYST LRSHMTGVVM PKTSSCKRDD ARSSSSEESS KRVKEEERKP
101: KVSKLYVLTD PSDSSLVVKD GYQWRKYGQK VTRDNPCPRA YFRCSFAPAC SVKKKVQRSA EDASMLVATY EGEHSHGQSS RPEAPHASGR SAPAPPRPQE
201: VEPPNPQRSL VEQMAVSLTN NPDFRAAMAA AISGRMSETS PPPTK

Best Arabidopsis Sequence Match ( AT1G80840.1 )
(BLAST)

001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK

Arabidopsis Description

WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.