Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 60.49 | 52.98 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 12.81 | 48.45 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 39.51 | 41.43 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 40.87 | 39.27 |
| VIT_07s0005g02570.t01 | Wine grape | nucleus | 46.32 | 33.6 |
| GSMUA_Achr10P... | Banana | nucleus | 44.14 | 32.66 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 43.05 | 32.51 |
| GSMUA_Achr7P08850_001 | Banana | nucleus | 34.06 | 32.22 |
| Os01t0289600-00 | Rice | nucleus, plastid | 35.69 | 31.87 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 16.35 | 31.58 |
| Os05t0137500-00 | Rice | nucleus | 40.6 | 31.43 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 27.79 | 31.29 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 16.35 | 31.25 |
| KRG96611 | Soybean | nucleus | 43.32 | 30.81 |
| GSMUA_Achr10P... | Banana | nucleus | 31.34 | 30.5 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 39.24 | 30.25 |
| Zm00001d008190_P001 | Maize | nucleus | 41.69 | 30.18 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 18.26 | 30.04 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 43.87 | 29.76 |
| GSMUA_Achr10P... | Banana | nucleus | 18.8 | 29.74 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 32.43 | 29.68 |
| KRH69145 | Soybean | nucleus | 38.96 | 29.55 |
| KRH33656 | Soybean | nucleus | 38.69 | 29.4 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 41.96 | 29.39 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 42.51 | 29.32 |
| GSMUA_Achr10P... | Banana | nucleus | 40.05 | 28.82 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 37.87 | 28.48 |
| Zm00001d040554_P001 | Maize | nucleus | 44.96 | 28.4 |
| EES00609 | Sorghum | nucleus | 43.6 | 27.49 |
| Zm00001d024768_P001 | Maize | nucleus | 39.78 | 26.69 |
| KXG21247 | Sorghum | nucleus | 37.87 | 24.52 |
| GSMUA_Achr11P... | Banana | nucleus | 16.35 | 24.49 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 19.07 | 24.22 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 23.98 | 23.85 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 15.26 | 23.83 |
| GSMUA_Achr10P... | Banana | nucleus | 18.26 | 23.26 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 23.71 | 22.72 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 17.17 | 22.5 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 26.43 | 21.6 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 16.08 | 21.45 |
| GSMUA_Achr10P... | Banana | nucleus | 26.98 | 20.67 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 18.26 | 20.0 |
| GSMUA_Achr5P09730_001 | Banana | nucleus | 31.34 | 16.15 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr2G18390_001 | EnsemblPlants:GSMUA_Achr2P18390_001 | EnsemblPlants:GSMUA_Achr2T18390_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0S930 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF30 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002964B1B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G18390_001]
Coordinates
chr2:-:18828598..18830237
Molecular Weight (calculated)
39435.7 Da
IEP (calculated)
9.039
GRAVY (calculated)
-0.431
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDQLTESYT ALHSQLLPAV QQKEHEIYRW QRIHLCKFIF VRHLRCLIPS QKDGKTGVAR QGEPSAHQIM EHGPARMRMI HGNSEDGDGE HSSSLNIISS
101: DRGIIPSAET QHSQVDGSSE NPNLTQETSS TATPSDLSNR RARVSVRARS DAPMISDGCQ WRKYGQKMAK GNPCPRAYYR CTMATGCPVR KQVQRYADDK
201: TVLITTYEGK HNHPLPPAAK AMANTTSAAA AMLLSGSTTS KDSLVASANG FLHPHILYDS TMATLSASTS FPTITLDLTK SANPIQQLLQ RAHPTHGPRQ
301: QAVVESVTAA ITTDPNFTAA LTAAITSIMG APTSSTGAGG SNVPSAGAHM VPGSPQLPKP CTTFSLN
101: DRGIIPSAET QHSQVDGSSE NPNLTQETSS TATPSDLSNR RARVSVRARS DAPMISDGCQ WRKYGQKMAK GNPCPRAYYR CTMATGCPVR KQVQRYADDK
201: TVLITTYEGK HNHPLPPAAK AMANTTSAAA AMLLSGSTTS KDSLVASANG FLHPHILYDS TMATLSASTS FPTITLDLTK SANPIQQLLQ RAHPTHGPRQ
301: QAVVESVTAA ITTDPNFTAA LTAAITSIMG APTSSTGAGG SNVPSAGAHM VPGSPQLPKP CTTFSLN
001: MEEHIQDRRE IAFLHSGEFL HGDSDSKDHQ PNESPVERHH ESSIKEVDFF AAKSQPFDLG HVRTTTIVGS SGFNDGLGLV NSCHGTSSND GDDKTKTQIS
101: RLKLELERLH EENHKLKHLL DEVSESYNDL QRRVLLARQT QVEGLHHKQH EDVPQAGSSQ ALENRRPKDM NHETPATTLK RRSPDDVDGR DMHRGSPKTP
201: RIDQNKSTNH EEQQNPHDQL PYRKARVSVR ARSDATTVND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILTTTY EGNHNHPLPP
301: SATAMAATTS AAAAMLLSGS SSSNLHQTLS SPSATSSSSF YHNFPYTSTI ATLSASAPFP TITLDLTNPP RPLQPPPQFL SQYGPAAFLP NANQIRSMNN
401: NNQQLLIPNL FGPQAPPREM VDSVRAAIAM DPNFTAALAA AISNIIGGGN NDNNNNTDIN DNKVDAKSGG SSNGDSPQLP QSCTTFSTN
101: RLKLELERLH EENHKLKHLL DEVSESYNDL QRRVLLARQT QVEGLHHKQH EDVPQAGSSQ ALENRRPKDM NHETPATTLK RRSPDDVDGR DMHRGSPKTP
201: RIDQNKSTNH EEQQNPHDQL PYRKARVSVR ARSDATTVND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILTTTY EGNHNHPLPP
301: SATAMAATTS AAAAMLLSGS SSSNLHQTLS SPSATSSSSF YHNFPYTSTI ATLSASAPFP TITLDLTNPP RPLQPPPQFL SQYGPAAFLP NANQIRSMNN
401: NNQQLLIPNL FGPQAPPREM VDSVRAAIAM DPNFTAALAA AISNIIGGGN NDNNNNTDIN DNKVDAKSGG SSNGDSPQLP QSCTTFSTN
Arabidopsis Description
WRKY47Probable WRKY transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.