Factsheet for Os01t0289600-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008190_P001	Maize	nucleus	53.77	43.59
EES00609	Sorghum	nucleus	56.2	39.69
Zm00001d040554_P001	Maize	nucleus	54.74	38.73
Os01t0586800-00	Rice	nucleus	17.52	37.11
Os05t0137500-00	Rice	nucleus	41.36	35.87
GSMUA_Achr2P18390_001	Banana	nucleus	31.87	35.69
VIT_07s0005g02570.t01	Wine grape	nucleus	39.42	32.02
KRG96611	Soybean	nucleus	38.2	30.43
KRH68345	Soybean	endoplasmic reticulum, vacuole	39.42	29.94
KRH69145	Soybean	nucleus	34.55	29.34
KRH33656	Soybean	nucleus	33.09	28.16
GSMUA_Achr11P...	Banana	nucleus	28.22	27.68
Os09t0417600-02	Rice	nucleus	18.0	22.63
Os09t0417800-01	Rice	nucleus	15.82	20.44
Os01t0185900-01	Rice	nucleus	24.33	19.72
Os06t0649000-01	Rice	nucleus	15.82	19.29
Os06t0146250-00	Rice	nucleus	28.22	19.21
Os02t0181300-01	Rice	nucleus	15.09	17.82
Os05t0567200-00	Rice	nucleus	23.11	16.18
Os02t0770500-00	Rice	nucleus	22.87	14.48
Os01t0246700-01	Rice	nucleus	9.73	9.69

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0P0V159	ProteinID:BAS71646.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os01g0289600
EnsemblPlants:Os01t0289600-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF29	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000393AE58	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

WRKY GENE 9Similar to WRKY transcription factor 28. (Os01t0289600-00)

Coordinates

chr1:+:10471169..10478800

Molecular Weight (calculated)

42570.3 Da

IEP (calculated)

11.432

GRAVY (calculated)

-0.378

Length

411 amino acids

Sequence
(BLAST)

001: MWSSGEWWRR TGGCGGCWTS STGATARCTI SICSVVHGAG HRRRGHGSVR RRGRPRRRRR RRVVPFAEQR RRRRRRRQQD EEGWWSRRDC GGGAGEGERR
101: AAGGGGGRAA VPETEATIEL LQISDGCQWR KYGQKMAKGN PCPRAYYRCT MAIGCPVRKQ VQRCAEDKTV LITTYEGNHN HQLPPAATTM ANTTSAAAAM
201: LLSGPAASRD GAAAALLGHH HHHHPAAMFH QSFPYASTMA TLSASAPFPT ITLDLTQTPA GGAGAASLLH ALHRPPVIHP GAAAQAMPFA VPPQLAMYLP
301: QQRAAAAGLG GAGAARQPSV METVTAALAA DPNFTTALAA AISSVVAGGA HHQALSTTPR GSAAGAGDGN GNGSSAAAVA TGAASPAATA EAPAASGSPP
401: RLATQSCTTS N

Best Arabidopsis Sequence Match ( AT4G04450.1 )
(BLAST)

001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ

Arabidopsis Description

WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.