Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G065380.2 | Barley | nucleus | 33.65 | 61.49 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 51.89 | 60.89 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 51.26 | 60.15 |
| KXG35639 | Sorghum | nucleus | 52.52 | 56.61 |
| Zm00001d020495_P001 | Maize | nucleus | 46.54 | 55.64 |
| Bra019123.1-P | Field mustard | nucleus | 24.21 | 39.69 |
| Os09t0417600-02 | Rice | nucleus | 38.99 | 37.92 |
| Solyc12g042590.1.1 | Tomato | nucleus | 23.58 | 34.72 |
| PGSC0003DMT400073710 | Potato | nucleus | 23.58 | 34.56 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 33.02 | 33.76 |
| Solyc08g067340.2.1 | Tomato | nucleus | 26.73 | 33.6 |
| KRH61669 | Soybean | nucleus | 22.96 | 33.18 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 28.93 | 32.86 |
| PGSC0003DMT400019061 | Potato | nucleus | 26.1 | 32.81 |
| KRH47344 | Soybean | nucleus | 32.08 | 32.8 |
| KRH44560 | Soybean | nucleus | 32.08 | 32.59 |
| PGSC0003DMT400019058 | Potato | nucleus | 26.73 | 32.57 |
| CDX75196 | Canola | nucleus | 28.3 | 31.8 |
| Solyc08g067360.2.1 | Tomato | nucleus | 25.79 | 31.78 |
| KRH23643 | Soybean | nucleus | 30.82 | 31.72 |
| CDX72327 | Canola | nucleus | 28.3 | 31.58 |
| CDY67287 | Canola | nucleus | 28.3 | 31.03 |
| CDY22299 | Canola | nucleus | 28.3 | 31.03 |
| Bra008435.1-P | Field mustard | nucleus | 28.3 | 31.03 |
| Os06t0649000-01 | Rice | nucleus | 32.39 | 30.56 |
| AT1G80840.1 | Thale cress | nucleus | 28.93 | 30.46 |
| CDX79347 | Canola | nucleus | 28.3 | 30.2 |
| KRH15674 | Soybean | nucleus | 26.73 | 30.14 |
| CDX87347 | Canola | nucleus | 28.3 | 30.0 |
| Bra035148.1-P | Field mustard | nucleus | 28.3 | 30.0 |
| AT4G31800.1 | Thale cress | nucleus | 29.25 | 30.0 |
| CDY39879 | Canola | nucleus | 28.93 | 29.97 |
| CDX88573 | Canola | nucleus | 28.3 | 29.9 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 29.56 | 29.65 |
| Bra010220.1-P | Field mustard | nucleus | 28.62 | 29.55 |
| AT2G25000.1 | Thale cress | nucleus | 25.16 | 29.52 |
| KRH09652 | Soybean | nucleus | 30.5 | 29.39 |
| Bra003588.1-P | Field mustard | nucleus | 27.36 | 29.29 |
| CDX67971 | Canola | nucleus | 27.36 | 29.29 |
| Bra011299.1-P | Field mustard | nucleus | 28.62 | 28.71 |
| CDX68787 | Canola | nucleus | 28.62 | 28.53 |
| Os01t0586800-00 | Rice | nucleus | 17.3 | 28.35 |
| Os02t0181300-01 | Rice | nucleus | 30.19 | 27.59 |
| KRH05350 | Soybean | nucleus | 26.73 | 27.24 |
| Bra023983.1-P | Field mustard | nucleus | 28.62 | 26.38 |
| CDY70096 | Canola | nucleus | 28.62 | 26.38 |
| PGSC0003DMT400073396 | Potato | nucleus | 29.56 | 26.11 |
| Solyc06g068460.2.1 | Tomato | nucleus | 29.56 | 26.11 |
| KRH52329 | Soybean | nucleus | 24.84 | 25.57 |
| PGSC0003DMT400051047 | Potato | nucleus | 28.3 | 25.35 |
| Solyc03g116890.2.1 | Tomato | nucleus | 27.04 | 24.57 |
| Os05t0137500-00 | Rice | nucleus | 24.53 | 16.46 |
| Os01t0289600-00 | Rice | nucleus, plastid | 20.44 | 15.82 |
| Os01t0185900-01 | Rice | nucleus | 21.38 | 13.41 |
| Os06t0146250-00 | Rice | nucleus | 24.84 | 13.08 |
| Os02t0770500-00 | Rice | nucleus | 24.53 | 12.02 |
| Os05t0567200-00 | Rice | nucleus | 17.92 | 9.71 |
| Os01t0246700-01 | Rice | nucleus | 6.29 | 4.84 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4347070 | EMBL:AK067834 | ProteinID:BAD28643.1 | ProteinID:BAD29280.1 |
| ProteinID:BAF25099.1 | ProteinID:BAT08100.1 | ncoils:Coil | EMBL:DQ298182 | ProteinID:EEE69711.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 | GO:GO:0009620 | GO:GO:0009719 |
| GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0043565 | GO:GO:1900425 | InterPro:IPR003657 |
| InterPro:IPR036576 | EnsemblPlantsGene:Os09g0417800 | EnsemblPlants:Os09t0417800-01 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF36 | UniProt:Q6EPZ0 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00003CE76C | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | RefSeq:XP_015610755.1 | SEG:seg | : | : | : |
Description
WRKY GENE 62WRKY transcription factor, Transcriptional repressor, Pathogen defense (Os09t0417800-01);Splicing variant of OsWRKY62, Pathogen defense (Os09t0417800-02)
Coordinates
chr9:-:14992943..14994888
Molecular Weight (calculated)
33517.1 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.325
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDGDGSSS PTDDSAAAGL LPLFSRSPAE DLEEKLRRAM EENARLTRAL DAILAGHHAH QRALLAPSLS PPPPSATARA PSVSTSCAAR EDAAPAVAAA
101: AASTACPSRQ QPPTAEPRPK VRTVRVRADA ADATDANSMA ETVKDGYQWR KYGQKVTRDN PYPRAYFRCA FAPSCPVKKK LQRCAEDRSM LVATYEGEHN
201: HALSTQTTEF VASGCTTSQH AGGSSSSPLP CSISINSSGR TITLDLTNQA GSGSIASCGV EAAAVSGELV TVLSPELRRH LVEEVVQVLK NDAEFVEAVT
301: NAVAARVVDQ IPHIPVHL
101: AASTACPSRQ QPPTAEPRPK VRTVRVRADA ADATDANSMA ETVKDGYQWR KYGQKVTRDN PYPRAYFRCA FAPSCPVKKK LQRCAEDRSM LVATYEGEHN
201: HALSTQTTEF VASGCTTSQH AGGSSSSPLP CSISINSSGR TITLDLTNQA GSGSIASCGV EAAAVSGELV TVLSPELRRH LVEEVVQVLK NDAEFVEAVT
301: NAVAARVVDQ IPHIPVHL
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.