Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22299 | Canola | nucleus | 99.66 | 99.66 |
| Bra008435.1-P | Field mustard | nucleus | 99.31 | 99.31 |
| CDX88573 | Canola | nucleus | 89.31 | 86.05 |
| CDX67971 | Canola | nucleus | 87.24 | 85.19 |
| AT1G80840.1 | Thale cress | nucleus | 88.62 | 85.1 |
| CDX87347 | Canola | nucleus | 87.24 | 84.33 |
| CDX79347 | Canola | nucleus | 86.55 | 84.23 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 36.55 | 55.21 |
| KRH23643 | Soybean | nucleus | 57.24 | 53.72 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 56.55 | 52.73 |
| KRH47344 | Soybean | nucleus | 55.86 | 52.09 |
| KRH44560 | Soybean | nucleus | 55.86 | 51.76 |
| KRH09652 | Soybean | nucleus | 56.21 | 49.39 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 32.07 | 48.95 |
| GSMUA_Achr11P... | Banana | nucleus | 39.31 | 46.53 |
| Solyc03g116890.2.1 | Tomato | nucleus | 55.17 | 45.71 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 36.9 | 45.53 |
| PGSC0003DMT400051047 | Potato | nucleus | 54.83 | 44.79 |
| CDX86714 | Canola | nucleus | 13.1 | 44.71 |
| GSMUA_Achr10P... | Banana | nucleus | 35.52 | 44.4 |
| CDX72327 | Canola | nucleus | 42.41 | 43.16 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 25.17 | 41.95 |
| Solyc06g068460.2.1 | Tomato | nucleus | 52.07 | 41.94 |
| CDX75196 | Canola | nucleus | 40.69 | 41.7 |
| PGSC0003DMT400073396 | Potato | nucleus | 51.72 | 41.67 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 39.31 | 41.45 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 39.66 | 41.07 |
| CDY39879 | Canola | nucleus | 42.41 | 40.07 |
| GSMUA_Achr10P... | Banana | nucleus | 38.97 | 39.24 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 38.97 | 39.1 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 30.0 | 39.01 |
| CDX68787 | Canola | nucleus | 42.76 | 38.87 |
| Zm00001d020492_P001 | Maize | nucleus | 38.62 | 37.09 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 42.76 | 37.01 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 41.38 | 36.7 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 41.03 | 36.39 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 41.03 | 36.17 |
| Os09t0417600-02 | Rice | nucleus | 40.69 | 36.09 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 40.0 | 36.02 |
| Os02t0181300-01 | Rice | nucleus | 43.1 | 35.92 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 40.34 | 35.89 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 39.31 | 35.74 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 40.0 | 35.58 |
| Zm00001d053746_P001 | Maize | nucleus | 39.31 | 35.51 |
| Os06t0649000-01 | Rice | nucleus | 41.03 | 35.31 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 39.31 | 35.19 |
| CDY70096 | Canola | nucleus | 41.72 | 35.07 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 39.66 | 34.74 |
| EER90124 | Sorghum | nucleus | 40.34 | 34.21 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 38.62 | 34.15 |
| Zm00001d036726_P001 | Maize | nucleus | 40.34 | 34.01 |
| EER98905 | Sorghum | nucleus, plastid | 38.28 | 33.95 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 38.62 | 33.94 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 33.79 | 33.91 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 38.62 | 33.84 |
| EES04642 | Sorghum | nucleus | 42.07 | 33.52 |
| Zm00001d015515_P001 | Maize | nucleus | 40.0 | 33.43 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 37.93 | 33.23 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 31.03 | 33.21 |
| EER88729 | Sorghum | nucleus | 39.66 | 33.05 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 39.66 | 33.05 |
| Zm00001d046805_P001 | Maize | nucleus | 39.66 | 32.76 |
| Zm00001d020495_P001 | Maize | nucleus | 29.66 | 32.33 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 38.97 | 32.29 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 38.62 | 32.18 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 30.0 | 32.1 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 38.28 | 31.44 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 38.28 | 31.27 |
| TraesCS7D01G497300.1 | Wheat | plastid | 40.0 | 31.18 |
| Zm00001d005749_P001 | Maize | nucleus | 36.55 | 30.2 |
| KXG35639 | Sorghum | nucleus | 30.69 | 30.17 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 38.28 | 29.92 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 40.0 | 28.57 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 38.28 | 28.39 |
| Os09t0417800-01 | Rice | nucleus | 31.03 | 28.3 |
| CDX97845 | Canola | nucleus | 17.93 | 21.58 |
| CDY26717 | Canola | nucleus | 18.62 | 18.82 |
| CDX94553 | Canola | nucleus | 31.38 | 18.53 |
| CDY16669 | Canola | nucleus | 31.38 | 18.5 |
| CDY56082 | Canola | nucleus | 24.14 | 18.28 |
| CDX90863 | Canola | nucleus | 31.72 | 18.15 |
| CDY21301 | Canola | nucleus | 31.72 | 18.15 |
| CDY68857 | Canola | nucleus | 23.1 | 18.11 |
| CDX82900 | Canola | nucleus | 32.07 | 17.85 |
| CDY11652 | Canola | nucleus | 23.45 | 17.75 |
| CDX81493 | Canola | nucleus | 18.28 | 17.1 |
| CDY01891 | Canola | nucleus | 19.31 | 17.07 |
| CDX96044 | Canola | nucleus | 18.97 | 16.77 |
| CDY12937 | Canola | nucleus | 31.72 | 16.67 |
| CDY19535 | Canola | nucleus | 31.72 | 16.67 |
| CDY22006 | Canola | nucleus | 27.93 | 16.53 |
| CDY07121 | Canola | nucleus | 27.93 | 16.36 |
| CDY24892 | Canola | nucleus | 28.62 | 15.84 |
| CDX85563 | Canola | nucleus | 16.9 | 15.81 |
| CDX69548 | Canola | nucleus | 23.45 | 15.74 |
| CDY21693 | Canola | nucleus | 27.93 | 15.61 |
| CDY63770 | Canola | nucleus | 27.59 | 15.56 |
| CDX81900 | Canola | nucleus | 27.59 | 15.41 |
| CDX83804 | Canola | nucleus | 26.9 | 15.15 |
| CDY08634 | Canola | nucleus | 26.21 | 15.11 |
| CDX96692 | Canola | nucleus | 26.9 | 15.09 |
| CDX70593 | Canola | nucleus | 27.24 | 15.02 |
| CDX78611 | Canola | nucleus | 26.9 | 14.8 |
| CDX69549 | Canola | nucleus | 27.93 | 14.7 |
| CDX85052 | Canola | nucleus | 27.59 | 14.55 |
| CDY19255 | Canola | nucleus | 11.72 | 14.29 |
| CDY28692 | Canola | nucleus | 26.21 | 14.13 |
| CDX86713 | Canola | nucleus | 3.79 | 9.32 |
| CDY72612 | Canola | nucleus | 6.55 | 7.88 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JPL1 | UniProt:A0A078JPL1 | EnsemblPlants:CDY67287 | ProteinID:CDY67287 |
| ProteinID:CDY67287.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00060582001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF3 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE10D9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng23990DBnaAnng23990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPL1]
Coordinates
chrLK035941:+:5970..8329
Molecular Weight (calculated)
32367.9 Da
IEP (calculated)
7.288
GRAVY (calculated)
-0.789
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYPSSLVD TSLDLTIGVT RMRVEEDSTT TALVDELNRM NAENKKLSEM LTLMCDKYNV LREQLMEYVN NTERDQVSPP KKRKSPARDD ANSSAVVGGV
101: SESSSTDQDD QYLGKKQREE TVVKEKVSRV YYKTEASDTT LVVKDGYQWR KYGQKVTRDN PSPRAYFKCA CAPSCSVKKK VQRSVEDQSV LVATYEGEHN
201: HPMPSQIDSN SGLNRSPGAA NRSRSLAEPV TTIDLTETKK VTSPSRVDFP EVQKLLVEQM ASSLTKDPNF TAALAAAVTG KLYQQNQTDK
101: SESSSTDQDD QYLGKKQREE TVVKEKVSRV YYKTEASDTT LVVKDGYQWR KYGQKVTRDN PSPRAYFKCA CAPSCSVKKK VQRSVEDQSV LVATYEGEHN
201: HPMPSQIDSN SGLNRSPGAA NRSRSLAEPV TTIDLTETKK VTSPSRVDFP EVQKLLVEQM ASSLTKDPNF TAALAAAVTG KLYQQNQTDK
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.