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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86714 Canola nucleus 14.01 84.71
CDX85563 Canola nucleus 48.25 80.0
CDX78611 Canola nucleus 81.71 79.7
CDX70593 Canola nucleus 80.93 79.09
AT5G15130.1 Thale cress nucleus 83.46 78.28
CDX69549 Canola nucleus 81.91 76.41
CDX69548 Canola nucleus 64.2 76.39
CDX85052 Canola nucleus 81.32 76.0
CDY28692 Canola nucleus 59.14 56.51
Zm00001d045375_P001 Maize nucleus 21.21 43.6
VIT_14s0108g00120.t01 Wine grape nucleus 41.63 42.63
GSMUA_Achr1P05240_001 Banana nucleus 26.65 42.02
Solyc02g067430.2.1 Tomato nucleus 35.21 41.14
PGSC0003DMT400017859 Potato nucleus 35.41 41.08
CDY26717 Canola nucleus 22.18 39.72
KRG93506 Soybean nucleus 37.16 38.98
CDX97845 Canola nucleus 17.7 37.76
KRH40121 Soybean nucleus 39.11 37.15
KRH01137 Soybean nucleus 38.91 36.97
CDY11652 Canola nucleus 26.85 36.03
CDY68857 Canola nucleus 25.68 35.68
CDX81900 Canola nucleus 35.02 34.68
CDY56082 Canola nucleus 25.68 34.46
CDY21693 Canola nucleus 34.63 34.3
CDX83804 Canola nucleus 34.24 34.17
CDX96692 Canola nucleus 34.24 34.04
TraesCS7D01G092400.1 Wheat nucleus 39.88 33.88
TraesCS3B01G130000.1 Wheat nucleus 32.3 33.88
CDX81493 Canola nucleus 20.43 33.87
TraesCS3D01G113300.1 Wheat nucleus 32.3 33.74
TraesCS7D01G092300.1 Wheat nucleus 38.91 33.06
Os06t0146250-00 Rice nucleus 38.72 32.95
Os01t0185900-01 Rice nucleus 31.91 32.35
HORVU3Hr1G020210.2 Barley nucleus 32.49 31.75
CDY01891 Canola nucleus 20.04 31.4
OQU75809 Sorghum nucleus 38.13 31.36
CDX96044 Canola nucleus 19.84 31.1
TraesCS7D01G092600.1 Wheat nucleus 35.99 30.58
Zm00001d008794_P001 Maize nucleus 32.1 30.56
TraesCS7D01G092500.2 Wheat nucleus 34.82 30.29
HORVU7Hr1G021260.1 Barley nucleus 35.8 30.21
CDX72327 Canola nucleus 16.34 29.47
CDY22006 Canola nucleus 28.02 29.39
EES02331 Sorghum nucleus 31.13 29.2
CDY07121 Canola nucleus 28.02 29.09
Zm00001d039532_P001 Maize nucleus 30.93 29.07
CDX75196 Canola nucleus 15.56 28.27
CDY16669 Canola nucleus 26.65 27.85
CDY67287 Canola nucleus 15.56 27.59
CDY22299 Canola nucleus 15.56 27.59
CDX94553 Canola nucleus 26.07 27.29
CDX88573 Canola nucleus 15.76 26.91
CDX67971 Canola nucleus 15.18 26.26
CDX79347 Canola nucleus 15.18 26.17
CDY39879 Canola nucleus 15.56 26.06
CDX90863 Canola nucleus 25.68 26.04
CDY21301 Canola nucleus 25.68 26.04
CDX68787 Canola nucleus 16.15 26.02
CDX87347 Canola nucleus 15.18 26.0
CDX82900 Canola nucleus 26.26 25.91
CDY12937 Canola nucleus 26.26 24.46
CDY70096 Canola nucleus 16.34 24.35
CDY19535 Canola nucleus 25.88 24.09
CDY19255 Canola nucleus 10.89 23.53
CDY24892 Canola nucleus 23.93 23.47
CDY08634 Canola nucleus 21.79 22.27
CDY72612 Canola nucleus 10.31 21.99
CDX86713 Canola nucleus 3.5 15.25
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80GO:A0A078JFE4UniProt:A0A078JFE4EnsemblPlants:CDY63770ProteinID:CDY63770
ProteinID:CDY63770.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0043565EnsemblPlantsGene:GSBRNA2T00039618001InterPro:IPR003657InterPro:IPR036576PFAM:PF03106PFscan:PS50811
PANTHER:PTHR31429PANTHER:PTHR31429:SF24SMART:SM00774SUPFAM:SSF118290UniParc:UPI0004EE57E6InterPro:WRKY_dom
InterPro:WRKY_dom_sfSEG:seg::::
Description
BnaCnng42630DBnaCnng42630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFE4]
Coordinates
chrLK034349:+:27165..29367
Molecular Weight (calculated)
55680.9 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.635
Length
514 amino acids
Sequence
(BLAST)
001: MEVLLKLPTS DSLLTVKDLG SAQIHEAIKG DGDHQELESA KAEMSEVKEE NEKLKGMLKR IENDYKSLKL RFFDVFQQEP ANKPTQDQKV VDLRTELSSL
101: DQEHELVSLS LGRRSSSPSD NTSKKEEKAD AITKEVNSDK KLNEVGLTLG FNNGNDREPN KSLSIVDSLE EASKVTGKRS SPSPPASGGD ADGEAGQQNN
201: VKRARVCVRA RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP VRKQVQRCAE DMSILITTYE GTHSHPLPLS ATTMASTTSA AASMLLSGSS
301: SSSAAKIIGN NLYDSSRFIN NSKSFYAPTL HPPLHPTVTL DLTAPQHSST SLPSLNFNKF SNSFQRFPST SLNFSSSSSY TPYPYNNVQF GPSNLGKPVQ
401: NSQSLTETLT KALTSDPSFH LVIAAAISSM VGSNGEQHGP RPSISNSIQQ TTETNNKKGC GGYFNSLLTS NIIANNQTGA FLDQPSSQLP PLSMFKNPSS
501: SSSTASFVNK DEKS
Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.