Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16669 | Canola | nucleus | 97.15 | 96.95 |
| Bra029491.1-P | Field mustard | nucleus | 95.52 | 95.33 |
| CDY21301 | Canola | nucleus | 82.69 | 80.08 |
| CDX90863 | Canola | nucleus | 82.48 | 79.88 |
| AT4G04450.1 | Thale cress | nucleus | 81.67 | 75.95 |
| CDX86714 | Canola | nucleus | 12.42 | 71.76 |
| CDX97845 | Canola | nucleus | 32.99 | 67.22 |
| CDX82900 | Canola | nucleus | 70.26 | 66.22 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 35.03 | 49.14 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 47.66 | 48.15 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 51.73 | 47.48 |
| KRH02033 | Soybean | nucleus | 46.84 | 47.03 |
| KRH36485 | Soybean | nucleus | 51.53 | 46.77 |
| PGSC0003DMT400042400 | Potato | nucleus | 51.53 | 45.75 |
| Solyc02g080890.2.1 | Tomato | nucleus | 51.12 | 45.64 |
| KRH11472 | Soybean | nucleus | 51.73 | 45.6 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 35.03 | 45.03 |
| PGSC0003DMT400056725 | Potato | nucleus | 45.21 | 44.76 |
| Solyc02g032950.2.1 | Tomato | nucleus | 45.21 | 44.58 |
| GSMUA_Achr10P... | Banana | nucleus | 44.81 | 44.35 |
| CDY19535 | Canola | nucleus | 49.49 | 44.02 |
| KRH51128 | Soybean | nucleus, plastid | 46.23 | 43.91 |
| CDY12937 | Canola | nucleus | 49.29 | 43.84 |
| GSMUA_Achr10P... | Banana | nucleus | 45.21 | 43.53 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 44.81 | 41.98 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 44.81 | 41.35 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 39.1 | 40.34 |
| CDY24892 | Canola | nucleus | 42.77 | 40.08 |
| CDY08634 | Canola | nucleus | 39.92 | 38.97 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 37.88 | 38.11 |
| CDY22006 | Canola | nucleus | 33.6 | 33.67 |
| CDY07121 | Canola | nucleus | 33.6 | 33.33 |
| Zm00001d039245_P001 | Maize | nucleus | 35.44 | 32.16 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 37.68 | 31.9 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 37.27 | 31.83 |
| EES02155 | Sorghum | nucleus | 36.66 | 31.58 |
| CDY22299 | Canola | nucleus | 18.53 | 31.38 |
| CDY67287 | Canola | nucleus | 18.53 | 31.38 |
| CDX81493 | Canola | nucleus | 19.76 | 31.29 |
| CDX88573 | Canola | nucleus | 19.14 | 31.23 |
| CDX87347 | Canola | nucleus | 18.74 | 30.67 |
| CDY68857 | Canola | nucleus | 22.81 | 30.27 |
| CDX75196 | Canola | nucleus | 17.31 | 30.04 |
| CDX79347 | Canola | nucleus | 18.13 | 29.87 |
| CDY56082 | Canola | nucleus | 23.01 | 29.5 |
| CDX72327 | Canola | nucleus | 17.11 | 29.47 |
| CDX67971 | Canola | nucleus | 17.72 | 29.29 |
| CDY11652 | Canola | nucleus | 22.81 | 29.24 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 37.07 | 28.93 |
| TraesCS3D01G173300.2 | Wheat | plastid | 37.47 | 28.93 |
| CDY26717 | Canola | nucleus | 16.9 | 28.92 |
| CDX96044 | Canola | nucleus | 19.14 | 28.66 |
| CDY01891 | Canola | nucleus | 19.14 | 28.66 |
| CDY39879 | Canola | nucleus | 17.52 | 28.01 |
| CDX81900 | Canola | nucleus | 29.33 | 27.75 |
| CDX68787 | Canola | nucleus | 17.92 | 27.59 |
| CDY21693 | Canola | nucleus | 29.12 | 27.55 |
| CDX96692 | Canola | nucleus | 28.72 | 27.27 |
| CDX83804 | Canola | nucleus | 28.31 | 26.99 |
| CDX69548 | Canola | nucleus | 23.42 | 26.62 |
| CDY63770 | Canola | nucleus | 27.29 | 26.07 |
| CDX70593 | Canola | nucleus | 27.29 | 25.48 |
| CDX78611 | Canola | nucleus | 27.29 | 25.43 |
| CDY70096 | Canola | nucleus | 17.52 | 24.93 |
| CDX85052 | Canola | nucleus | 27.9 | 24.91 |
| CDX69549 | Canola | nucleus | 27.49 | 24.5 |
| CDX85563 | Canola | nucleus | 15.27 | 24.19 |
| CDY28692 | Canola | nucleus | 25.66 | 23.42 |
| CDY19255 | Canola | nucleus | 9.98 | 20.59 |
| CDY72612 | Canola | nucleus | 9.16 | 18.67 |
| Os01t0246700-01 | Rice | nucleus | 15.68 | 18.64 |
| CDX86713 | Canola | nucleus | 4.07 | 16.95 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078E574 | EnsemblPlants:CDX94553 | ProteinID:CDX94553 | ProteinID:CDX94553.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00157805001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEF74E | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC09g22830D
Coordinates
chrLK031882:+:1004589..1007729
Molecular Weight (calculated)
54021.7 Da
IEP (calculated)
5.776
GRAVY (calculated)
-0.794
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRFPVSLGG QGDNLKQTQP SDEQHHRPIM DEVDFFRSEK RDDQNVITEE THRLHVKREN SRVDDDDDRS MGINTGLNLL TANTGSDESL VDDGLSVDME
101: EKRTKIENTQ LREELKKSNE ENQRLKEMLS QTTNNFNSLQ MQLVAVMRQE EDHHHLATIE SKDKDTNRHE APEMVPRQFI DLGLPSAEVS SDERITSRSP
201: QSLLEDSSSR QRAKRVLEIE ESPENESNGW GNPSKVSKHN ASSSNGNGNA IDQSAAEATM RKARVSVRAR SEAPMLSDGC QWRKYGQKMA KGNPCPRAYY
301: RCTMAVGCPV RKQVQRCADD RSILITTYEG NHNHPLPPAA MYMASTTTAA ASMLLSGSTI MATISASAPF PTITLDLTES ASDVNGPTNN NPLMQFAQRS
401: GFAELNQSGL PQMMGQALYY NQQQSKFSGL HIPSQSLNAG ESVNAAMPAN PNFAAALAAA ITSIINGSSN HQNGSSNSSN NNVTTSSGDR Q
101: EKRTKIENTQ LREELKKSNE ENQRLKEMLS QTTNNFNSLQ MQLVAVMRQE EDHHHLATIE SKDKDTNRHE APEMVPRQFI DLGLPSAEVS SDERITSRSP
201: QSLLEDSSSR QRAKRVLEIE ESPENESNGW GNPSKVSKHN ASSSNGNGNA IDQSAAEATM RKARVSVRAR SEAPMLSDGC QWRKYGQKMA KGNPCPRAYY
301: RCTMAVGCPV RKQVQRCADD RSILITTYEG NHNHPLPPAA MYMASTTTAA ASMLLSGSTI MATISASAPF PTITLDLTES ASDVNGPTNN NPLMQFAQRS
401: GFAELNQSGL PQMMGQALYY NQQQSKFSGL HIPSQSLNAG ESVNAAMPAN PNFAAALAAA ITSIINGSSN HQNGSSNSSN NNVTTSSGDR Q
001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.