Factsheet for TraesCS3B01G199000.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G167200.1	Wheat	nucleus	98.1	98.96
TraesCS3D01G173300.2	Wheat	plastid	97.59	88.99
HORVU3Hr1G033740.2	Barley	nucleus, plastid	94.31	86.96
Os01t0246700-01	Rice	nucleus	54.83	77.0
Zm00001d039245_P001	Maize	nucleus	59.48	63.77
EES02155	Sorghum	nucleus	61.03	62.11
CDX97845	Canola	nucleus	21.03	50.62
GSMUA_Achr3P03090_001	Banana	nucleus	32.59	49.48
Solyc02g032950.2.1	Tomato	nucleus	39.66	46.18
GSMUA_Achr5P16750_001	Banana	nucleus	38.28	45.68
PGSC0003DMT400056725	Potato	nucleus	38.79	45.36
VIT_10s0116g01200.t01	Wine grape	nucleus	40.52	43.93
Solyc02g080890.2.1	Tomato	nucleus	40.86	43.09
PGSC0003DMT400042400	Potato	nucleus	41.03	43.04
GSMUA_Achr10P...	Banana	nucleus	36.55	42.74
GSMUA_Achr2P15200_001	Banana	nucleus	39.14	42.67
GSMUA_Achr6P13630_001	Banana	nucleus	38.1	42.18
GSMUA_Achr6P05880_001	Banana	nucleus	34.31	41.81
GSMUA_Achr10P...	Banana	nucleus	36.03	40.98
KRH36485	Soybean	nucleus	37.76	40.48
KRH02033	Soybean	nucleus	33.97	40.29
VIT_12s0059g00880.t01	Wine grape	nucleus	41.03	40.13
CDX82900	Canola	nucleus	35.86	39.92
KRH11472	Soybean	nucleus	38.28	39.86
PGSC0003DMT400038852	Potato	nucleus	38.1	39.68
AT1G62300.1	Thale cress	nucleus	37.76	39.6
AT4G04450.1	Thale cress	nucleus	35.86	39.39
KRH51128	Soybean	nucleus, plastid	35.0	39.27
CDY19535	Canola	nucleus	37.07	38.95
CDY12937	Canola	nucleus	37.07	38.95
CDY21301	Canola	nucleus	33.97	38.86
AT4G22070.1	Thale cress	nucleus	36.03	38.85
Bra027057.1-P	Field mustard	nucleus	36.9	38.77
Bra013584.1-P	Field mustard	nucleus	35.86	38.66
CDX90863	Canola	nucleus	33.79	38.66
Bra034482.1-P	Field mustard	nucleus	33.62	38.46
Bra000793.1-P	Field mustard	nucleus	34.31	38.34
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	32.07	38.11
CDY24892	Canola	nucleus	34.31	37.98
CDX94553	Canola	nucleus	31.9	37.68
CDY08634	Canola	nucleus	32.59	37.57
CDY16669	Canola	nucleus	31.38	36.99
KRH22585	Soybean	nucleus	39.14	36.97
Bra029491.1-P	Field mustard	nucleus	30.69	36.18
Solyc07g051840.2.1	Tomato	nucleus	39.31	36.13
KRH25355	Soybean	nucleus	36.21	34.2
KRH56160	Soybean	nucleus	36.72	33.92
TraesCS1B01G434300.1	Wheat	nucleus	33.97	31.47
TraesCS3B01G130000.1	Wheat	nucleus	25.17	29.8
TraesCS5B01G224100.1	Wheat	nucleus	14.48	25.45
TraesCS7B01G418500.2	Wheat	nucleus	14.14	24.92
TraesCS6B01G175100.2	Wheat	nucleus	14.83	24.23
TraesCS7B01G419400.1	Wheat	nucleus	13.45	24.22
TraesCS5B01G224000.1	Wheat	nucleus	13.62	23.87
TraesCS7B01G418400.1	Wheat	nucleus	13.28	23.62
TraesCS6B01G357600.1	Wheat	nucleus	22.41	23.21
TraesCS7B01G418600.1	Wheat	nucleus	11.55	23.18

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF31	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3B01G199000
EnsemblPlants:TraesCS3B01G199000.2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:226787313..226789921

Molecular Weight (calculated)

60726.1 Da

IEP (calculated)

7.415

GRAVY (calculated)

-0.561

Length

580 amino acids

Sequence
(BLAST)

001: MDKGHLGGGG GGGGLLALDA SPRQLGFLNL LSPAPFHRSM EADDGGGGGG GGRGRRSIEV DFFSDEKKNM KKSRASAGAD AEDHKDQASA AGLAIKKEDL
101: TINLLPGNNT RSDRSMVVDD DGASRADQDR NGRNTGELAV IQAELSRMNE ENQRLRGMLT QVNNSYHALQ MHLVALMQQR TQMPPVQPQQ PPTHEDGKNE
201: SAIVPRQFLG LGPSGASADV AEEPSNSSTE VGSPRRSSSN GNEDPERGEN PDGPSTAGWL PGRGMSQQQQ QQLGAAAKGH DQQAQEATMR KARVSVRARS
301: EAPIIADGCQ WRKYGQKMAK GNPCPRAYYR CTMATGCPVR KQVLLKVQRC AEDRTILITT YEGTHNHPLP PAAMAMASTT SAAASMLLSG SMPSADGAGL
401: MSSNFLARTV LPCSSSMATI SASAPFPTVT LDLTHAPPGA PNAMPLNVAR PHAPGQFHVP MPGGGMAPAF AMPPHMLYNQ SKFSGLQMSS DSVDAGQFAQ
501: PRPPMGLPGQ LSDTVSAAAA AITADPNFTV ALAAAISSIM AGQHAAGNSN ANNSNNNTSN NNVTTTSNNT TSNNTNSETQ

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.