Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21301 | Canola | nucleus | 98.03 | 98.03 |
| Bra000793.1-P | Field mustard | nucleus | 99.01 | 96.72 |
| CDY16669 | Canola | nucleus | 80.67 | 83.13 |
| CDX94553 | Canola | nucleus | 79.88 | 82.48 |
| AT4G04450.1 | Thale cress | nucleus | 80.67 | 77.46 |
| CDX97845 | Canola | nucleus | 33.92 | 71.37 |
| CDX86714 | Canola | nucleus | 11.64 | 69.41 |
| CDX82900 | Canola | nucleus | 69.82 | 67.95 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 53.65 | 50.84 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 34.52 | 50.0 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 47.93 | 50.0 |
| Solyc02g032950.2.1 | Tomato | nucleus | 48.32 | 49.2 |
| PGSC0003DMT400056725 | Potato | nucleus | 48.13 | 49.19 |
| KRH36485 | Soybean | nucleus | 52.07 | 48.8 |
| KRH02033 | Soybean | nucleus | 46.94 | 48.67 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 36.49 | 48.43 |
| Solyc02g080890.2.1 | Tomato | nucleus | 52.07 | 48.0 |
| PGSC0003DMT400042400 | Potato | nucleus | 52.07 | 47.74 |
| KRH11472 | Soybean | nucleus | 52.07 | 47.4 |
| CDY19535 | Canola | nucleus | 51.08 | 46.92 |
| CDY12937 | Canola | nucleus | 50.69 | 46.56 |
| KRH51128 | Soybean | nucleus, plastid | 46.94 | 46.03 |
| GSMUA_Achr10P... | Banana | nucleus | 44.97 | 45.97 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 41.81 | 44.54 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 45.96 | 44.47 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 46.55 | 44.36 |
| GSMUA_Achr10P... | Banana | nucleus | 44.58 | 44.31 |
| CDY24892 | Canola | nucleus | 44.77 | 43.32 |
| CDY08634 | Canola | nucleus | 41.22 | 41.55 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 37.08 | 38.52 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 38.66 | 33.79 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 38.26 | 33.74 |
| CDY22006 | Canola | nucleus | 32.54 | 33.67 |
| CDY07121 | Canola | nucleus | 32.54 | 33.33 |
| Zm00001d039245_P001 | Maize | nucleus | 35.5 | 33.27 |
| EES02155 | Sorghum | nucleus | 36.49 | 32.46 |
| CDY22299 | Canola | nucleus | 18.15 | 31.72 |
| CDY67287 | Canola | nucleus | 18.15 | 31.72 |
| CDX81493 | Canola | nucleus | 19.33 | 31.61 |
| CDX88573 | Canola | nucleus | 18.54 | 31.23 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 38.26 | 30.84 |
| CDX87347 | Canola | nucleus | 18.15 | 30.67 |
| CDY26717 | Canola | nucleus | 17.36 | 30.66 |
| TraesCS3D01G173300.2 | Wheat | plastid | 38.46 | 30.66 |
| CDX79347 | Canola | nucleus | 17.75 | 30.2 |
| CDY68857 | Canola | nucleus | 21.7 | 29.73 |
| CDX67971 | Canola | nucleus | 17.36 | 29.63 |
| CDX81900 | Canola | nucleus | 29.98 | 29.29 |
| CDY21693 | Canola | nucleus | 29.78 | 29.09 |
| CDY11652 | Canola | nucleus | 21.89 | 28.98 |
| CDY56082 | Canola | nucleus | 21.89 | 28.98 |
| CDX75196 | Canola | nucleus | 16.17 | 28.98 |
| CDX96692 | Canola | nucleus | 29.39 | 28.82 |
| CDX96044 | Canola | nucleus | 18.54 | 28.66 |
| CDX83804 | Canola | nucleus | 28.99 | 28.54 |
| CDX72327 | Canola | nucleus | 15.98 | 28.42 |
| CDY01891 | Canola | nucleus | 18.34 | 28.35 |
| CDY39879 | Canola | nucleus | 16.57 | 27.36 |
| CDX68787 | Canola | nucleus | 16.77 | 26.65 |
| CDX69548 | Canola | nucleus | 22.09 | 25.93 |
| CDY63770 | Canola | nucleus | 26.04 | 25.68 |
| CDX70593 | Canola | nucleus | 25.44 | 24.52 |
| CDX78611 | Canola | nucleus | 25.44 | 24.48 |
| CDY19255 | Canola | nucleus | 11.24 | 23.95 |
| CDX85052 | Canola | nucleus | 25.84 | 23.82 |
| CDY70096 | Canola | nucleus | 16.17 | 23.77 |
| CDX69549 | Canola | nucleus | 25.64 | 23.59 |
| CDY28692 | Canola | nucleus | 24.65 | 23.23 |
| CDX85563 | Canola | nucleus | 14.2 | 23.23 |
| CDX86713 | Canola | nucleus | 4.73 | 20.34 |
| Os01t0246700-01 | Rice | nucleus | 14.99 | 18.4 |
| CDY72612 | Canola | nucleus | 8.28 | 17.43 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DUH9 | EnsemblPlants:CDX90863 | ProteinID:CDX90863 | ProteinID:CDX90863.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00151581001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF31 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE4253 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g25430D
Coordinates
chrLK031864:+:917712..920543
Molecular Weight (calculated)
55747.2 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.738
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRFPVSLGG PHDNPKQPQS SDEQPHRAMM DEVDFFRSEK RDDQNIITDE TNTVHVKREN SRVVDDDDRS TGINTGLNLL TAHTGSDESM VDDGLSVDME
101: EKRSKIENVQ LREELKKAAE EIQRLKEMLS QTTNNFNSLQ MQLVAVMRQQ EDHHHLAMTG SKDMTNKRHE GSDMVPRQFM ELGLPTAEVS SDERTTVRSR
201: SPPSLLENSS SRQRGKRLLE REESPETQSN GWGNPNKVSK HNASSSNDNV SAIDQSTAEA TMRKARVSVR ARSEAPTLSD GCHWRKYGQK MAKGNPCPRA
301: YFRCTMAVGC PVRKQVQRCA EERSILITTY EGNHNHPLPP AAMYMASTTT AAASMLLSGS TMSSQDGLMN PTNLFARTML PCSSSMATIS ASAPFPTITL
401: DLTESASNFP QRSGFTELNQ SGLPQMMGQA LYYNQQQSKF SGLQIPTQSL NAGENVSAAT AAIAANPNFA AALAAALTSI INGPNNHKNG DSNTGNNNVR
501: TSSVERQ
101: EKRSKIENVQ LREELKKAAE EIQRLKEMLS QTTNNFNSLQ MQLVAVMRQQ EDHHHLAMTG SKDMTNKRHE GSDMVPRQFM ELGLPTAEVS SDERTTVRSR
201: SPPSLLENSS SRQRGKRLLE REESPETQSN GWGNPNKVSK HNASSSNDNV SAIDQSTAEA TMRKARVSVR ARSEAPTLSD GCHWRKYGQK MAKGNPCPRA
301: YFRCTMAVGC PVRKQVQRCA EERSILITTY EGNHNHPLPP AAMYMASTTT AAASMLLSGS TMSSQDGLMN PTNLFARTML PCSSSMATIS ASAPFPTITL
401: DLTESASNFP QRSGFTELNQ SGLPQMMGQA LYYNQQQSKF SGLQIPTQSL NAGENVSAAT AAIAANPNFA AALAAALTSI INGPNNHKNG DSNTGNNNVR
501: TSSVERQ
001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.