Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025692.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX81900 | Canola | nucleus | 73.44 | 34.1 |
| CDX83804 | Canola | nucleus | 71.78 | 33.59 |
| CDY21693 | Canola | nucleus | 71.78 | 33.33 |
| CDX96692 | Canola | nucleus | 71.37 | 33.27 |
| AT1G18860.1 | Thale cress | nucleus | 69.29 | 31.63 |
| Zm00001d045375_P001 | Maize | nucleus | 19.92 | 19.2 |
| CDX85563 | Canola | nucleus | 21.99 | 17.1 |
| KRH63398 | Soybean | nucleus | 27.39 | 12.43 |
| CDY11652 | Canola | nucleus | 19.5 | 12.27 |
| CDY68857 | Canola | nucleus | 18.26 | 11.89 |
| CDY56082 | Canola | nucleus | 18.26 | 11.49 |
| CDX70593 | Canola | nucleus | 23.24 | 10.65 |
| CDX78611 | Canola | nucleus | 23.24 | 10.63 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 21.58 | 10.61 |
| Solyc03g113120.2.1 | Tomato | nucleus | 22.82 | 10.5 |
| PGSC0003DMT400046570 | Potato | nucleus | 22.82 | 10.48 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 21.16 | 10.37 |
| CDY63770 | Canola | nucleus | 21.99 | 10.31 |
| KRH54509 | Soybean | nucleus | 26.14 | 10.24 |
| Zm00001d039532_P001 | Maize | nucleus | 23.24 | 10.24 |
| CDX69549 | Canola | nucleus | 23.24 | 10.16 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 25.31 | 10.08 |
| EES02331 | Sorghum | nucleus | 22.82 | 10.04 |
| Zm00001d008794_P001 | Maize | nucleus | 22.41 | 10.0 |
| CDX97845 | Canola | nucleus | 9.96 | 9.96 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 21.58 | 9.89 |
| Os01t0185900-01 | Rice | nucleus | 20.75 | 9.86 |
| OQU75809 | Sorghum | nucleus | 25.31 | 9.76 |
| CDX85052 | Canola | nucleus | 21.99 | 9.64 |
| Os06t0146250-00 | Rice | nucleus | 24.07 | 9.6 |
| KRH03442 | Soybean | nucleus | 22.82 | 9.17 |
| CDX94553 | Canola | nucleus | 18.67 | 9.16 |
| CDY16669 | Canola | nucleus | 18.67 | 9.15 |
| KRH56941 | Soybean | nucleus | 21.16 | 9.12 |
| CDX81493 | Canola | nucleus | 11.2 | 8.71 |
| CDY28692 | Canola | nucleus | 19.09 | 8.55 |
| CDX96044 | Canola | nucleus | 11.62 | 8.54 |
| CDY01891 | Canola | nucleus | 11.62 | 8.54 |
| CDY21301 | Canola | nucleus | 17.84 | 8.48 |
| Solyc06g070990.2.1 | Tomato | nucleus | 22.82 | 8.47 |
| CDX90863 | Canola | nucleus | 17.43 | 8.28 |
| CDY22006 | Canola | nucleus | 16.6 | 8.16 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 19.92 | 8.12 |
| CDY07121 | Canola | nucleus | 16.6 | 8.08 |
| CDX82900 | Canola | nucleus | 17.01 | 7.87 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 19.5 | 7.77 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 18.67 | 7.39 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 18.26 | 7.27 |
| CDY24892 | Canola | nucleus | 15.77 | 7.25 |
| CDY08634 | Canola | nucleus | 14.94 | 7.16 |
| CDX79347 | Canola | nucleus | 8.71 | 7.05 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 17.43 | 6.94 |
| CDX69548 | Canola | nucleus | 12.03 | 6.71 |
| CDY19535 | Canola | nucleus | 15.35 | 6.7 |
| CDY12937 | Canola | nucleus | 15.35 | 6.7 |
| CDY67287 | Canola | nucleus | 7.88 | 6.55 |
| CDY22299 | Canola | nucleus | 7.88 | 6.55 |
| CDX88573 | Canola | nucleus | 7.88 | 6.31 |
| CDX67971 | Canola | nucleus | 7.47 | 6.06 |
| CDX87347 | Canola | nucleus | 7.47 | 6.0 |
| CDX75196 | Canola | nucleus | 6.64 | 5.65 |
| CDX72327 | Canola | nucleus | 6.64 | 5.61 |
| CDY39879 | Canola | nucleus | 7.05 | 5.54 |
| CDX68787 | Canola | nucleus | 7.05 | 5.33 |
| CDY70096 | Canola | nucleus | 5.81 | 4.06 |
| CDX86714 | Canola | nucleus | 0.83 | 2.35 |
| CDX86713 | Canola | nucleus | 0.83 | 1.69 |
| CDY19255 | Canola | nucleus | 0.83 | 0.84 |
| CDY26717 | Canola | nucleus | 0.83 | 0.7 |
| Bra025693.1-P | Field mustard | nucleus | 0.83 | 0.7 |
Protein Annotations
| EnsemblPlants:CDY72612 | EnsemblPlantsGene:GSBRNA2T00033936001 | ncoils:Coil | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | ProteinID:CDY72612 |
| ProteinID:CDY72612.1 | SEG:seg | UniParc:UPI000253F4CA | UniProt:A0A078K3X9 | MapMan:35.1 | : |
Description
BnaA06g38480DBnaA06g38480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K3X9]
Coordinates
chrLK052247:+:154..1356
Molecular Weight (calculated)
28029.4 Da
IEP (calculated)
5.649
GRAVY (calculated)
-1.244
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKDDFLKSR HGGEERHAEM RKLDASHDDP HQDIIRSKLD STKVEIEEAR EENRILKSSL SRIKKEFEVL QTQYNQLTVQ HEDLNKFSTK GHHQDKNEDE
101: EKERISERDE LVLLSLGTRL KSPVPSVSVT NKEEKTKDFM DETGDEKNID EHKRSSYQGL SLGFEYKDLS NPTEKFEIGH NQANTSLVVS NKTKIPSENS
201: FGFKNDGDDH EDEEELLPQN LVKKARVSVR SRCETTIRYR K
101: EKERISERDE LVLLSLGTRL KSPVPSVSVT NKEEKTKDFM DETGDEKNID EHKRSSYQGL SLGFEYKDLS NPTEKFEIGH NQANTSLVVS NKTKIPSENS
201: FGFKNDGDDH EDEEELLPQN LVKKARVSVR SRCETTIRYR K
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.