Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68787 | Canola | nucleus | 93.64 | 83.07 |
| CDX72327 | Canola | nucleus | 79.51 | 78.95 |
| CDY39879 | Canola | nucleus | 81.27 | 74.92 |
| AT4G31800.1 | Thale cress | nucleus | 79.15 | 72.26 |
| CDY70096 | Canola | nucleus | 76.33 | 62.61 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 35.69 | 52.6 |
| CDX86714 | Canola | nucleus | 15.19 | 50.59 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 31.1 | 46.32 |
| Solyc08g067340.2.1 | Tomato | nucleus | 40.64 | 45.45 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 37.46 | 45.11 |
| PGSC0003DMT400019061 | Potato | nucleus | 39.93 | 44.66 |
| Solyc08g067360.2.1 | Tomato | nucleus | 40.64 | 44.57 |
| PGSC0003DMT400019058 | Potato | nucleus | 40.99 | 44.44 |
| KRH61669 | Soybean | nucleus | 33.92 | 43.64 |
| GSMUA_Achr10P... | Banana | nucleus | 35.69 | 43.53 |
| KRH15674 | Soybean | nucleus | 42.4 | 42.55 |
| GSMUA_Achr11P... | Banana | nucleus | 36.75 | 42.45 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 25.8 | 41.95 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 46.64 | 41.64 |
| CDY22299 | Canola | nucleus | 41.7 | 40.69 |
| CDY67287 | Canola | nucleus | 41.7 | 40.69 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 39.22 | 40.36 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 39.58 | 40.0 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 31.45 | 39.91 |
| CDX67971 | Canola | nucleus | 40.99 | 39.06 |
| CDX88573 | Canola | nucleus | 41.34 | 38.87 |
| CDX79347 | Canola | nucleus | 40.64 | 38.59 |
| GSMUA_Achr10P... | Banana | nucleus | 38.87 | 38.19 |
| CDX87347 | Canola | nucleus | 40.28 | 38.0 |
| KRH05350 | Soybean | nucleus | 40.99 | 37.18 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 36.75 | 35.99 |
| Os02t0181300-01 | Rice | nucleus | 43.11 | 35.06 |
| Os06t0649000-01 | Rice | nucleus | 40.99 | 34.42 |
| KRH52329 | Soybean | nucleus | 37.46 | 34.3 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 42.05 | 34.0 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 41.7 | 33.91 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 42.05 | 33.71 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 39.58 | 33.43 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 38.52 | 33.33 |
| Zm00001d053746_P001 | Maize | nucleus | 37.81 | 33.33 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 37.81 | 33.23 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 31.8 | 33.21 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 38.52 | 33.13 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 38.16 | 33.13 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 38.16 | 33.13 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 38.16 | 33.03 |
| Zm00001d015515_P001 | Maize | nucleus | 40.28 | 32.85 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 31.45 | 32.84 |
| EER90124 | Sorghum | nucleus | 39.58 | 32.75 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 37.46 | 32.72 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 40.99 | 32.68 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 37.81 | 32.62 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 36.75 | 32.6 |
| Zm00001d020492_P001 | Maize | nucleus | 34.63 | 32.45 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 37.81 | 32.33 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 37.46 | 32.02 |
| Zm00001d020495_P001 | Maize | nucleus | 30.04 | 31.95 |
| EER88729 | Sorghum | nucleus | 39.22 | 31.9 |
| EES04642 | Sorghum | nucleus | 40.99 | 31.87 |
| Zm00001d046805_P001 | Maize | nucleus | 39.22 | 31.62 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 32.16 | 31.49 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 36.75 | 31.42 |
| Zm00001d036726_P001 | Maize | nucleus | 37.81 | 31.1 |
| KXG35639 | Sorghum | nucleus | 32.16 | 30.85 |
| EER98905 | Sorghum | nucleus, plastid | 35.34 | 30.58 |
| Os09t0417600-02 | Rice | nucleus | 35.34 | 30.58 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 37.46 | 30.46 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 35.34 | 30.3 |
| TraesCS7D01G497300.1 | Wheat | plastid | 38.87 | 29.57 |
| Os09t0417800-01 | Rice | nucleus | 31.8 | 28.3 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 36.4 | 27.76 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 38.16 | 26.6 |
| Zm00001d005749_P001 | Maize | nucleus | 32.86 | 26.5 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 35.69 | 25.83 |
| CDX97845 | Canola | nucleus | 18.73 | 21.99 |
| CDY26717 | Canola | nucleus | 20.14 | 19.86 |
| CDX81493 | Canola | nucleus | 20.49 | 18.71 |
| CDX96044 | Canola | nucleus | 20.85 | 17.99 |
| CDY11652 | Canola | nucleus | 24.03 | 17.75 |
| CDY01891 | Canola | nucleus | 20.49 | 17.68 |
| CDY16669 | Canola | nucleus | 30.39 | 17.48 |
| CDX94553 | Canola | nucleus | 30.04 | 17.31 |
| CDY12937 | Canola | nucleus | 33.22 | 17.03 |
| CDY19535 | Canola | nucleus | 33.22 | 17.03 |
| CDY24892 | Canola | nucleus | 31.1 | 16.79 |
| CDY68857 | Canola | nucleus | 21.91 | 16.76 |
| CDY56082 | Canola | nucleus | 22.61 | 16.71 |
| CDY22006 | Canola | nucleus | 28.62 | 16.53 |
| CDX82900 | Canola | nucleus | 30.39 | 16.51 |
| CDX90863 | Canola | nucleus | 28.98 | 16.17 |
| CDY21301 | Canola | nucleus | 28.98 | 16.17 |
| CDY07121 | Canola | nucleus | 28.27 | 16.16 |
| CDY08634 | Canola | nucleus | 28.27 | 15.9 |
| CDX69548 | Canola | nucleus | 24.03 | 15.74 |
| CDY63770 | Canola | nucleus | 28.27 | 15.56 |
| CDX85563 | Canola | nucleus | 16.96 | 15.48 |
| CDX70593 | Canola | nucleus | 28.27 | 15.21 |
| CDX78611 | Canola | nucleus | 28.27 | 15.18 |
| CDX81900 | Canola | nucleus | 27.56 | 15.03 |
| CDY21693 | Canola | nucleus | 27.56 | 15.03 |
| CDX96692 | Canola | nucleus | 27.21 | 14.89 |
| CDX83804 | Canola | nucleus | 26.86 | 14.76 |
| CDX69549 | Canola | nucleus | 28.27 | 14.52 |
| CDY28692 | Canola | nucleus | 27.56 | 14.5 |
| CDX85052 | Canola | nucleus | 27.92 | 14.36 |
| CDY19255 | Canola | nucleus | 10.6 | 12.61 |
| CDX86713 | Canola | nucleus | 3.53 | 8.47 |
| CDY72612 | Canola | nucleus | 5.65 | 6.64 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CDL6 | EnsemblPlants:CDX75196 | ProteinID:CDX75196 | ProteinID:CDX75196.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00121042001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF32 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDD2CD | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | : | : | : | : | : |
Description
BnaA01g05060D
Coordinates
chrLK031804:+:42996..44452
Molecular Weight (calculated)
31867.5 Da
IEP (calculated)
8.579
GRAVY (calculated)
-0.769
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCPSFLDIS LNLNTNNLDR SFPEKLPKKE LKVSTSADLK RKWMVKDESA SELREELNRV NSENKKLTEM LATVYEKYYA LQHHLEKLQS RRQSPETDQF
101: EQPTKRRKQD SDESLSLPNG FSTVTDSFDK AKISTVYVSA VCSDTSLTVK DGYQWRKYGQ KVTRDNPSPR AYFRCSFAPS CPVKKKVQRS AEDPSILVAT
201: YEGTHNHLGP NASEGDATSQ VGSRTVTLEM VHGGHSLALE KNERETMQEV LVQQMASSLT KDSKFTAALA AAISGRLMEQ SRT
101: EQPTKRRKQD SDESLSLPNG FSTVTDSFDK AKISTVYVSA VCSDTSLTVK DGYQWRKYGQ KVTRDNPSPR AYFRCSFAPS CPVKKKVQRS AEDPSILVAT
201: YEGTHNHLGP NASEGDATSQ VGSRTVTLEM VHGGHSLALE KNERETMQEV LVQQMASSLT KDSKFTAALA AAISGRLMEQ SRT
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.