Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G225600.1 | Wheat | nucleus | 84.64 | 94.86 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 81.4 | 91.52 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 71.43 | 80.06 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 75.47 | 71.61 |
| Os09t0417600-02 | Rice | nucleus | 59.57 | 67.58 |
| EER98905 | Sorghum | nucleus, plastid | 55.53 | 63.0 |
| Zm00001d020492_P001 | Maize | nucleus | 50.67 | 62.25 |
| Zm00001d005749_P001 | Maize | nucleus | 49.06 | 51.85 |
| Bra019123.1-P | Field mustard | nucleus | 23.99 | 45.88 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 35.85 | 42.77 |
| Solyc12g042590.1.1 | Tomato | nucleus | 24.8 | 42.59 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 31.0 | 42.44 |
| PGSC0003DMT400073710 | Potato | nucleus | 24.26 | 41.47 |
| KRH44560 | Soybean | nucleus | 33.96 | 40.26 |
| KRH47344 | Soybean | nucleus | 33.69 | 40.19 |
| KRH23643 | Soybean | nucleus | 33.15 | 39.81 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 30.19 | 38.75 |
| Bra008435.1-P | Field mustard | nucleus | 30.19 | 38.62 |
| CDY22299 | Canola | nucleus | 30.19 | 38.62 |
| CDY67287 | Canola | nucleus | 29.92 | 38.28 |
| AT1G80840.1 | Thale cress | nucleus | 31.0 | 38.08 |
| Bra003588.1-P | Field mustard | nucleus | 30.46 | 38.05 |
| CDX67971 | Canola | nucleus | 30.46 | 38.05 |
| Bra035148.1-P | Field mustard | nucleus | 30.46 | 37.67 |
| CDX87347 | Canola | nucleus | 30.46 | 37.67 |
| CDX72327 | Canola | nucleus | 28.84 | 37.54 |
| CDX88573 | Canola | nucleus | 30.46 | 37.54 |
| CDX79347 | Canola | nucleus | 29.92 | 37.25 |
| PGSC0003DMT400019058 | Potato | nucleus | 25.88 | 36.78 |
| Solyc08g067340.2.1 | Tomato | nucleus | 25.07 | 36.76 |
| KRH09652 | Soybean | nucleus | 32.61 | 36.67 |
| KRH15674 | Soybean | nucleus | 27.76 | 36.52 |
| CDX75196 | Canola | nucleus | 27.76 | 36.4 |
| KRH61669 | Soybean | nucleus | 21.56 | 36.36 |
| Solyc08g067360.2.1 | Tomato | nucleus | 24.8 | 35.66 |
| PGSC0003DMT400019061 | Potato | nucleus | 24.26 | 35.57 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 30.19 | 35.33 |
| PGSC0003DMT400073396 | Potato | nucleus | 34.23 | 35.28 |
| Solyc06g068460.2.1 | Tomato | nucleus | 33.69 | 34.72 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 30.19 | 34.25 |
| Bra010220.1-P | Field mustard | nucleus | 28.3 | 34.09 |
| KRH05350 | Soybean | nucleus | 28.57 | 33.97 |
| AT2G25000.1 | Thale cress | nucleus | 24.8 | 33.95 |
| AT4G31800.1 | Thale cress | nucleus | 28.3 | 33.87 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 29.65 | 33.74 |
| CDY39879 | Canola | nucleus | 27.76 | 33.55 |
| Bra011299.1-P | Field mustard | nucleus | 28.3 | 33.12 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 29.11 | 32.93 |
| CDX68787 | Canola | nucleus | 28.3 | 32.92 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 29.65 | 31.61 |
| PGSC0003DMT400051047 | Potato | nucleus | 29.65 | 30.99 |
| CDY70096 | Canola | nucleus | 28.57 | 30.72 |
| Bra023983.1-P | Field mustard | nucleus | 28.57 | 30.72 |
| Solyc03g116890.2.1 | Tomato | nucleus | 28.57 | 30.29 |
| TraesCS7D01G497300.1 | Wheat | plastid | 30.19 | 30.11 |
| KRH52329 | Soybean | nucleus | 23.18 | 27.83 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 21.02 | 15.85 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 22.91 | 14.38 |
| TraesCS1D01G412500.1 | Wheat | nucleus | 22.91 | 14.38 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 23.45 | 14.38 |
| TraesCS3D01G173300.2 | Wheat | plastid | 23.45 | 13.68 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 20.49 | 12.56 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 19.68 | 12.07 |
| TraesCS6D01G306300.1 | Wheat | nucleus | 18.06 | 11.99 |
Protein Annotations
| MapMan:15.5.22 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF3 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5D01G232900 | EnsemblPlants:TraesCS5D01G232900.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:340096862..340100354
Molecular Weight (calculated)
40077.8 Da
IEP (calculated)
8.810
GRAVY (calculated)
-0.425
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTARRSPVC LDLMVGLPMV REPSPARCAG MRADAGIVGS ACGRAASTTM TNGEAKILEA KFTEVSEENR RLTEMIGYLY ANNQNFARQG PEGEGEQPAS
101: TAASPTSPVG KKRGRESMET SDSGDANSDK KINMVEAEHV DVKSPLSNGT CRRIKVKRVC TRIDPSDTSL VVKDGYQWRK YGQKVTRDNP SPRAYFRCAF
201: APSCPVKKKV SYKLRPIRRA LSCSTIWCLY GLKSLCSVTD FLVRSMVVQV QRSAEDSSVV EATYEGEHNH PRPTGASELP SCAAQGGGSV PCSISINSSG
301: PTITLDLTKN GGGVQVVEAG EAQPDLKKVC REVASPEFRA ALVEQMARAL TGDRKFTDAL AAAILRKLPD Y
101: TAASPTSPVG KKRGRESMET SDSGDANSDK KINMVEAEHV DVKSPLSNGT CRRIKVKRVC TRIDPSDTSL VVKDGYQWRK YGQKVTRDNP SPRAYFRCAF
201: APSCPVKKKV SYKLRPIRRA LSCSTIWCLY GLKSLCSVTD FLVRSMVVQV QRSAEDSSVV EATYEGEHNH PRPTGASELP SCAAQGGGSV PCSISINSSG
301: PTITLDLTKN GGGVQVVEAG EAQPDLKKVC REVASPEFRA ALVEQMARAL TGDRKFTDAL AAAILRKLPD Y
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.