Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61669 | Soybean | nucleus | 55.66 | 78.18 |
| KRH15674 | Soybean | nucleus | 44.34 | 48.58 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 28.8 | 46.35 |
| KRH05350 | Soybean | nucleus | 44.01 | 43.59 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 25.24 | 41.05 |
| PGSC0003DMT400019061 | Potato | nucleus | 33.33 | 40.71 |
| Solyc08g067340.2.1 | Tomato | nucleus | 32.69 | 39.92 |
| Bra019123.1-P | Field mustard | nucleus | 24.92 | 39.69 |
| GSMUA_Achr11P... | Banana | nucleus | 31.07 | 39.18 |
| GSMUA_Achr10P... | Banana | nucleus | 28.8 | 38.36 |
| PGSC0003DMT400019058 | Potato | nucleus | 32.36 | 38.31 |
| CDX72327 | Canola | nucleus | 35.28 | 38.25 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 39.16 | 38.17 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 28.8 | 37.87 |
| Solyc08g067360.2.1 | Tomato | nucleus | 31.39 | 37.6 |
| KRH23643 | Soybean | nucleus | 37.54 | 37.54 |
| CDX75196 | Canola | nucleus | 34.3 | 37.46 |
| KRH47344 | Soybean | nucleus | 37.54 | 37.3 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 33.33 | 36.79 |
| GSMUA_Achr10P... | Banana | nucleus | 33.98 | 36.46 |
| AT4G31800.1 | Thale cress | nucleus | 36.57 | 36.45 |
| KRH44560 | Soybean | nucleus | 36.57 | 36.1 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 32.04 | 36.0 |
| CDY39879 | Canola | nucleus | 35.6 | 35.83 |
| KRH54838 | Soybean | cytosol, nucleus | 27.18 | 35.74 |
| KRH09652 | Soybean | nucleus | 37.54 | 35.15 |
| Bra010220.1-P | Field mustard | nucleus | 34.95 | 35.06 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 19.74 | 35.06 |
| Bra011299.1-P | Field mustard | nucleus | 35.92 | 35.02 |
| AT2G25000.1 | Thale cress | nucleus | 30.42 | 34.69 |
| CDX68787 | Canola | nucleus | 35.6 | 34.48 |
| KRH15655 | Soybean | nucleus | 29.77 | 33.09 |
| Zm00001d053746_P001 | Maize | nucleus | 34.3 | 33.02 |
| KRH61668 | Soybean | nucleus | 24.92 | 32.77 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 23.62 | 32.74 |
| Bra023983.1-P | Field mustard | nucleus | 35.6 | 31.88 |
| CDY70096 | Canola | nucleus | 35.6 | 31.88 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 29.45 | 31.49 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 32.36 | 31.35 |
| KRH05362 | Soybean | nucleus | 28.16 | 31.3 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 33.01 | 31.29 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 33.01 | 31.19 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 33.01 | 31.19 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 32.69 | 31.17 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 29.13 | 31.14 |
| Zm00001d020492_P001 | Maize | nucleus | 30.1 | 30.79 |
| Os02t0181300-01 | Rice | nucleus | 34.63 | 30.75 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 32.36 | 30.67 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 32.36 | 30.49 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 31.72 | 30.43 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 32.36 | 30.4 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 26.54 | 30.26 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 32.69 | 30.15 |
| Os06t0649000-01 | Rice | nucleus | 32.69 | 29.97 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 26.21 | 29.89 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 33.66 | 29.89 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 33.66 | 29.71 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 33.66 | 29.46 |
| EES04642 | Sorghum | nucleus | 34.63 | 29.4 |
| Zm00001d015515_P001 | Maize | nucleus | 33.01 | 29.39 |
| Zm00001d020495_P001 | Maize | nucleus | 25.24 | 29.32 |
| Zm00001d046805_P001 | Maize | nucleus | 32.36 | 28.49 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 32.69 | 28.45 |
| EER90124 | Sorghum | nucleus | 31.39 | 28.36 |
| Zm00001d036726_P001 | Maize | nucleus | 31.39 | 28.2 |
| EER98905 | Sorghum | nucleus, plastid | 29.77 | 28.13 |
| EER88729 | Sorghum | nucleus | 31.39 | 27.87 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 31.39 | 27.87 |
| KXG35639 | Sorghum | nucleus | 26.54 | 27.8 |
| Os09t0417600-02 | Rice | nucleus | 29.13 | 27.52 |
| TraesCS7D01G497300.1 | Wheat | plastid | 32.69 | 27.15 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 28.16 | 26.28 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 27.83 | 25.98 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 27.83 | 25.98 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 26.86 | 25.15 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 32.69 | 24.88 |
| Os09t0417800-01 | Rice | nucleus | 25.57 | 24.84 |
| Zm00001d005749_P001 | Maize | nucleus | 27.83 | 24.5 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 27.83 | 23.18 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 28.8 | 22.76 |
| KRG89544 | Soybean | nucleus | 11.33 | 21.47 |
| KRH38314 | Soybean | nucleus | 15.21 | 19.42 |
| KRH42243 | Soybean | nucleus | 11.33 | 19.34 |
| KRH02502 | Soybean | nucleus | 21.04 | 16.62 |
| KRH19450 | Soybean | nucleus | 20.06 | 16.19 |
| KRH46231 | Soybean | nucleus | 24.92 | 15.84 |
| KRH02033 | Soybean | nucleus | 22.65 | 14.31 |
| KRG98705 | Soybean | nucleus | 21.68 | 14.02 |
| KRG93506 | Soybean | nucleus | 22.01 | 13.88 |
| KRH36485 | Soybean | nucleus | 24.27 | 13.86 |
| KRH73787 | Soybean | nucleus | 18.77 | 13.81 |
| KRH12664 | Soybean | nucleus | 20.06 | 13.75 |
| KRH11472 | Soybean | nucleus | 24.27 | 13.46 |
| KRH33656 | Soybean | nucleus | 21.04 | 13.46 |
| KRH51128 | Soybean | nucleus, plastid | 22.33 | 13.35 |
| KRH37650 | Soybean | nucleus | 19.74 | 13.32 |
| KRH69145 | Soybean | nucleus | 20.71 | 13.22 |
| KRH63398 | Soybean | nucleus | 22.33 | 12.99 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 22.65 | 12.94 |
| KRH56941 | Soybean | nucleus | 22.98 | 12.7 |
| KRG96611 | Soybean | nucleus | 21.04 | 12.6 |
| KRH74791 | Soybean | nucleus | 20.39 | 12.38 |
| KRH58361 | Soybean | nucleus | 19.42 | 12.37 |
| KRH03442 | Soybean | nucleus | 23.95 | 12.33 |
| KRH54509 | Soybean | nucleus | 24.27 | 12.2 |
| KRH69334 | Soybean | nucleus | 20.06 | 11.76 |
| KRH22585 | Soybean | nucleus | 22.98 | 11.56 |
| KRH25355 | Soybean | nucleus | 22.98 | 11.56 |
| KRG99150 | Soybean | nucleus | 19.74 | 11.53 |
| KRH56160 | Soybean | nucleus | 23.3 | 11.46 |
| KRH40121 | Soybean | nucleus | 20.06 | 11.46 |
| KRH01137 | Soybean | nucleus | 19.74 | 11.28 |
| KRH33270 | Soybean | nucleus | 10.68 | 10.82 |
Protein Annotations
| EntrezGene:100127373 | MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0R0JHC6 | EMBL:ACUP02003418 | EMBL:ACUP02003419 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_06G061900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:KRH52329 | ProteinID:KRH52329 | ProteinID:KRH52329.1 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF39 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI0006ED567E | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:4653700..4666752
Molecular Weight (calculated)
35131.5 Da
IEP (calculated)
6.834
GRAVY (calculated)
-0.696
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMEPTCVDT SLNLNVIPSP HIDHLAGEVL FEELRRLSSE NKRLTETLNH LCESYVALQK HLSEFSQLRN ANFDKEGTCA VPSLKRKPES ENCVNLFGTE
101: CNTITEEETF KRPKHSTEPK VSKVLTRTDA SDTGLYVRDG YQWRKYGQKV TRDNPSPRAY FKCSYAPSCP VKKKVQRSLQ DKSFLVATYE GKHNHGVFRD
201: LLKPSSSIQE TSIMDNYLPM TVMPNDKLDT MNIDLCLCNR AQTDIRRCDD IKEQNDRGSN SKIEEYASSP VKDPDFIMPL AEAVVHSLNS QSYKQVGLNL
301: SLGLPEPHH
101: CNTITEEETF KRPKHSTEPK VSKVLTRTDA SDTGLYVRDG YQWRKYGQKV TRDNPSPRAY FKCSYAPSCP VKKKVQRSLQ DKSFLVATYE GKHNHGVFRD
201: LLKPSSSIQE TSIMDNYLPM TVMPNDKLDT MNIDLCLCNR AQTDIRRCDD IKEQNDRGSN SKIEEYASSP VKDPDFIMPL AEAVVHSLNS QSYKQVGLNL
301: SLGLPEPHH
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.