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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG94362 Soybean extracellular 83.7 83.18
VIT_14s0066g00150.t01 Wine grape nucleus 46.71 40.6
Solyc02g067900.2.1 Tomato cytosol 40.75 39.63
GSMUA_Achr6P22990_001 Banana cytosol 15.99 38.64
PGSC0003DMT400017933 Potato cytosol 40.13 38.44
HORVU3Hr1G092230.1 Barley cytosol 9.09 36.25
AT3G27420.1 Thale cress nucleus 25.71 33.61
CDY03968 Canola nucleus 24.45 33.05
TraesCS3D01G408700.2 Wheat nucleus 26.02 29.64
CDY42568 Canola plastid 24.45 29.21
CDY36364 Canola mitochondrion 24.45 28.26
TraesCS3A01G414200.1 Wheat nucleus 20.69 25.19
AT5G40600.1 Thale cress endoplasmic reticulum 25.08 24.62
TraesCS3B01G449000.1 Wheat cytosol 22.88 24.58
KXG33957 Sorghum nucleus 20.38 23.9
Bra033010.1-P Field mustard cytosol 22.88 14.84
CDY34147 Canola cytosol 23.51 14.07
Protein Annotations
Gene3D:1.20.1270.220EntrezGene:100790673MapMan:35.2UniProt:A0A0R0FMA3EMBL:ACUP02009931EnsemblPlantsGene:GLYMA_16G067800
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:GTE1/GTE6InterPro:IPR027353
InterPro:IPR038336ProteinID:KRH07094.1EnsemblPlants:KRH07095ProteinID:KRH07095ProteinID:KRH07095.1InterPro:NET_dom
InterPro:NET_sfPFAM:PF17035PFscan:PS51525PANTHER:PTHR22880PANTHER:PTHR22880:SF163UniParc:UPI0003DE93FD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr16:+:6715004..6726045
Molecular Weight (calculated)
36183.5 Da
IEP (calculated)
4.568
GRAVY (calculated)
-0.538
Length
319 amino acids
Sequence
(BLAST)
001: MSNASKSFVA SDKYERVGPD YFGYYSSEVV NLLSQDEDVF PVSTQTPELP ESKYEEGRKK NLVNQSDNCS GPLYSNAVGA CLSDFKKDRL KSLLRQSVIA
101: LSSEVDQVVD PVFAAYHLQA NLKSKSQSLN DTATASDNVV QVPCKKLKMS SSSSSDRFLE QATNVNPQCS RKDPKSHYFL GLPQSEYLSK EKTTDDIQFL
201: LENDNVEVAE MVTEYANDLS GTLGYMEEQL ELLLDTIMFK CRSMTLAEKQ RLQSLIQKLP ARNLDRVVEL IWRNRPIEEQ NCDKIFVDLE KEDDATLWRL
301: YYYIEAVEKA KSLSCSQEA
Best Arabidopsis Sequence Match ( AT5G40600.2 )
(BLAST)
001: MSKRAAEEMT PSLESNRTGP DFFGYYRAQV EELLSQEEKI PHHNHVDAKK SSAEIIGAEL SDVKQEKLNA LLRQCVLNSI PEVDEMQSRV DSMYLMSQLS
101: NKKRSTLPTN AESVIPEDPR CKEVEDDLRL LMKSDPSLVK EIVGKHSSDL LARLNERQQH LEKLLDNVVT TCRPMSRGEK RDLQKSIKEL PAKNLERVAG
201: IIKNHYVALG KEMPDDVFVI NMEEEDKVLL WRLHYFVVAV QSARKLAS
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27420.1); Has 18 /.../st hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). [Source:TAIR;Acc:AT5G40600]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.