Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G66470.1 | KRH14475 | AT2G42870.1 | 21798944 |
| AT1G66470.1 | KRH73670 | AT2G42870.1 | 21798944 |
| AT1G66470.1 | KRH04244 | AT5G47100.1 | 21798944 |
| AT1G66470.1 | KRH28207 | AT5G47100.1 | 21798944 |
| AT1G66470.1 | KRH57533 | AT5G47100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15121 | Soybean | nucleus | 91.53 | 92.15 |
| GSMUA_Achr3P01250_001 | Banana | cytosol, nucleus, plastid | 26.44 | 64.46 |
| KRG97923 | Soybean | nucleus | 68.47 | 59.59 |
| KRH30960 | Soybean | nucleus | 65.76 | 57.23 |
| VIT_14s0006g01470.t01 | Wine grape | nucleus | 51.53 | 43.8 |
| CDX68049 | Canola | nucleus | 42.37 | 43.1 |
| CDX96145 | Canola | nucleus | 42.37 | 43.1 |
| CDY11694 | Canola | nucleus | 42.37 | 43.1 |
| KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 13.56 | 43.01 |
| CDY55674 | Canola | nucleus | 42.03 | 42.76 |
| AT1G66470.1 | Thale cress | nucleus | 41.02 | 40.6 |
| AT5G37800.1 | Thale cress | nucleus | 42.03 | 40.39 |
| Solyc02g091440.1.1 | Tomato | nucleus | 43.05 | 40.06 |
| PGSC0003DMT400078776 | Potato | nucleus | 43.05 | 40.06 |
| CDY61813 | Canola | nucleus | 41.36 | 40.0 |
| CDY58387 | Canola | nucleus | 41.36 | 39.74 |
| Bra019708.1-P | Field mustard | nucleus | 41.02 | 39.41 |
| Bra004169.1-P | Field mustard | nucleus | 34.92 | 38.43 |
| TraesCS3A01G006300.1 | Wheat | cytosol, nucleus, plastid | 34.58 | 37.23 |
| GSMUA_Achr10P... | Banana | nucleus | 37.29 | 36.91 |
| TraesCS3B01G010400.1 | Wheat | nucleus | 34.24 | 36.86 |
| TraesCS3B01G007700.1 | Wheat | nucleus | 34.24 | 36.86 |
| TraesCS3D01G004300.1 | Wheat | cytosol, nucleus, plastid | 33.9 | 36.36 |
| GSMUA_Achr2P22860_001 | Banana | nucleus | 39.66 | 36.34 |
| Zm00001d017804_P001 | Maize | nucleus | 34.24 | 34.24 |
| Os02t0710300-01 | Rice | nucleus | 34.58 | 34.0 |
| EES07381 | Sorghum | nucleus | 34.58 | 33.33 |
| TraesCS6D01G256500.1 | Wheat | cytosol | 31.86 | 33.22 |
| EES00435 | Sorghum | nucleus | 32.54 | 33.1 |
| TraesCS6A01G276100.1 | Wheat | nucleus | 32.54 | 32.99 |
| TraesCS6D01G256600.1 | Wheat | nucleus | 32.2 | 32.87 |
| TraesCS6B01G303500.1 | Wheat | nucleus | 31.86 | 32.87 |
| TraesCS6D01G256300.1 | Wheat | nucleus | 32.54 | 32.65 |
| TraesCS6A01G276200.1 | Wheat | cytosol, nucleus, plastid | 31.86 | 32.53 |
| TraesCS6B01G303600.1 | Wheat | cytosol, nucleus, plastid | 31.19 | 32.39 |
| GSMUA_Achr6P09370_001 | Banana | nucleus | 36.95 | 32.15 |
| Zm00001d008444_P001 | Maize | nucleus | 34.92 | 31.69 |
| TraesCS6D01G256400.1 | Wheat | nucleus | 28.81 | 30.91 |
| TraesCS7B01G195800.1 | Wheat | nucleus | 29.83 | 30.14 |
| TraesCS7A01G229900.1 | Wheat | nucleus | 28.81 | 29.82 |
| TraesCS7D01G230600.1 | Wheat | nucleus | 28.81 | 29.72 |
| Os01t0111500-01 | Rice | nucleus | 29.49 | 29.49 |
| Os06t0496400-01 | Rice | nucleus | 26.44 | 26.53 |
| HORVU7Hr1G046580.1 | Barley | plasma membrane, vacuole | 29.49 | 26.28 |
| KRH49427 | Soybean | nucleus, plastid | 14.58 | 24.43 |
| KRH00301 | Soybean | nucleus, plastid | 14.24 | 23.86 |
| KRH65648 | Soybean | nucleus, plastid | 14.58 | 23.63 |
| KRH75991 | Soybean | nucleus, plastid | 13.9 | 23.03 |
| KRH28464 | Soybean | nucleus | 15.59 | 19.01 |
| KRH35669 | Soybean | nucleus | 22.03 | 18.16 |
| KRH15444 | Soybean | nucleus | 21.36 | 18.0 |
| KRH77007 | Soybean | nucleus | 15.25 | 17.93 |
| KRH57944 | Soybean | nucleus | 15.25 | 17.72 |
| KRH61404 | Soybean | nucleus | 19.66 | 17.47 |
| KRH35668 | Soybean | nucleus | 20.68 | 17.33 |
| KRG91107 | Soybean | nucleus | 21.02 | 17.32 |
| KRH64060 | Soybean | nucleus | 14.24 | 17.28 |
| KRH05600 | Soybean | nucleus | 20.34 | 17.0 |
| KRH53884 | Soybean | nucleus | 13.22 | 16.67 |
| KRG91108 | Soybean | nucleus | 19.32 | 16.15 |
| KRH61303 | Soybean | nucleus | 14.24 | 15.91 |
| KRH43543 | Soybean | nucleus | 14.58 | 15.87 |
| KRH59559 | Soybean | nucleus | 14.24 | 15.79 |
| KRH04603 | Soybean | nucleus | 14.92 | 15.6 |
| KRH52010 | Soybean | nucleus | 13.56 | 15.5 |
| KRH09982 | Soybean | nucleus | 14.92 | 9.89 |
| KRH23349 | Soybean | nucleus | 14.92 | 9.78 |
| KRH47179 | Soybean | nucleus | 13.56 | 9.28 |
| KRH44227 | Soybean | nucleus | 13.9 | 9.26 |
Protein Annotations
| EntrezGene:100803231 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A0R0L105 | EMBL:ACUP02001261 | EnsemblPlantsGene:GLYMA_02G246400 |
| GO:GO:0001046 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH73015 |
| ProteinID:KRH73015 | ProteinID:KRH73015.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF19 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233792A | InterPro:bHLH_dom | : | : |
Description
hypothetical protein
Coordinates
chr2:+:43441160..43443049
Molecular Weight (calculated)
32632.1 Da
IEP (calculated)
6.257
GRAVY (calculated)
-0.584
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSLTSNGV NEYQKCVVEE EDGSQSTNGL SNDSASAITH SPPLCSNSNE YVHNKSTHYQ LEEAESLINF KANEYNTLIQ GSESFLSVQK SWLFPKESNL
101: HEGYNQWNHA ISPKSTTDMR LVQNFSCFET SADYSSIFNG AKEKQHGESS SSGWLYSEPN VPSDSLLESA AQELVLTKRS SMGENMQATN AKKPCTSASK
201: AAKPKLNPFK DPQSVAAKNR RERISERLKI LQELVPNGSK VDLVTMLEKA ISYVKFLQLQ VKVLAADEFW PVQGGKAPDI SQVRQAIDAI LSSQR
101: HEGYNQWNHA ISPKSTTDMR LVQNFSCFET SADYSSIFNG AKEKQHGESS SSGWLYSEPN VPSDSLLESA AQELVLTKRS SMGENMQATN AKKPCTSASK
201: AAKPKLNPFK DPQSVAAKNR RERISERLKI LQELVPNGSK VDLVTMLEKA ISYVKFLQLQ VKVLAADEFW PVQGGKAPDI SQVRQAIDAI LSSQR
001: MSLINEHCNE RNYISTPNSS EDLSSPQNCG LDEGASASSS STINSDHQNN QGFVFYPSGE TIEDHNSLMD FNASSFFTFD NHRSLISPVT NGGAFPVVDG
101: NMSYSYDGWS HHQVDSISPR VIKTPNSFET TSSFGLTSNS MSKPATNHGN GDWLYSGSTI VNIGSRHEST SPKLAGNKRP FTGENTQLSK KPSSGTNGKI
201: KPKATTSPKD PQSLAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAI GYVKFLQVQV KVLAADEFWP AQGGKAPDIS QVKEAIDAIL SSSQRDSNST
301: RETSIAE
101: NMSYSYDGWS HHQVDSISPR VIKTPNSFET TSSFGLTSNS MSKPATNHGN GDWLYSGSTI VNIGSRHEST SPKLAGNKRP FTGENTQLSK KPSSGTNGKI
201: KPKATTSPKD PQSLAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAI GYVKFLQVQV KVLAADEFWP AQGGKAPDIS QVKEAIDAIL SSSQRDSNST
301: RETSIAE
Arabidopsis Description
BHLH86RSL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.