Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG91108 | Soybean | nucleus | 91.19 | 90.93 |
KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 19.6 | 74.19 |
PGSC0003DMT400008370 | Potato | nucleus | 28.12 | 50.0 |
KRH35669 | Soybean | nucleus | 44.6 | 43.85 |
KRG91107 | Soybean | nucleus | 44.03 | 43.3 |
Solyc10g049780.1.1 | Tomato | nucleus | 31.82 | 41.18 |
GSMUA_Achr2P17130_001 | Banana | nucleus | 35.51 | 39.56 |
EER99632 | Sorghum | nucleus | 30.97 | 38.65 |
Zm00001d006733_P001 | Maize | nucleus | 31.25 | 38.46 |
Os07t0588400-00 | Rice | nucleus | 32.1 | 38.31 |
AT4G33880.1 | Thale cress | nucleus | 38.07 | 38.07 |
Bra034587.1-P | Field mustard | nucleus | 36.36 | 36.99 |
AT2G14760.3 | Thale cress | nucleus | 35.8 | 36.95 |
Bra036969.1-P | Field mustard | nucleus | 36.65 | 36.86 |
CDX72435 | Canola | nucleus | 36.65 | 36.86 |
Zm00001d021988_P001 | Maize | nucleus | 30.68 | 36.61 |
Bra011476.1-P | Field mustard | nucleus | 36.08 | 36.6 |
CDY49379 | Canola | nucleus | 36.36 | 36.57 |
CDY28328 | Canola | nucleus | 36.93 | 36.52 |
CDX75386 | Canola | nucleus | 35.8 | 36.31 |
CDX81461 | Canola | nucleus | 35.23 | 35.84 |
CDY37221 | Canola | nucleus | 35.23 | 35.84 |
Bra039819.1-P | Field mustard | nucleus | 34.94 | 35.55 |
CDX69011 | Canola | nucleus | 34.94 | 35.45 |
KRH61404 | Soybean | nucleus | 30.97 | 32.83 |
KRH05600 | Soybean | nucleus | 30.4 | 30.31 |
KRH15444 | Soybean | nucleus | 29.83 | 30.0 |
CDY48431 | Canola | nucleus | 26.42 | 28.97 |
KRH00301 | Soybean | nucleus, plastid | 11.65 | 23.3 |
KRH77007 | Soybean | nucleus | 16.19 | 22.71 |
KRH65648 | Soybean | nucleus, plastid | 11.65 | 22.53 |
KRH75991 | Soybean | nucleus, plastid | 11.36 | 22.47 |
KRH28464 | Soybean | nucleus | 15.34 | 22.31 |
KRH57944 | Soybean | nucleus | 15.91 | 22.05 |
KRH53884 | Soybean | nucleus | 14.49 | 21.79 |
KRH49427 | Soybean | nucleus, plastid | 10.8 | 21.59 |
KRH64060 | Soybean | nucleus | 14.77 | 21.4 |
KRH15121 | Soybean | nucleus | 17.33 | 20.82 |
KRH73015 | Soybean | nucleus | 17.33 | 20.68 |
KRH04603 | Soybean | nucleus | 16.19 | 20.21 |
KRH59559 | Soybean | nucleus | 15.06 | 19.92 |
KRH43543 | Soybean | nucleus | 15.06 | 19.56 |
KRH30960 | Soybean | nucleus | 17.61 | 18.29 |
KRH52010 | Soybean | nucleus | 13.35 | 18.22 |
KRG97923 | Soybean | nucleus | 17.33 | 17.99 |
KRH61303 | Soybean | nucleus | 12.78 | 17.05 |
KRH44227 | Soybean | nucleus | 17.61 | 14.0 |
KRH47179 | Soybean | nucleus | 16.76 | 13.69 |
KRH09982 | Soybean | nucleus | 16.19 | 12.81 |
KRH23349 | Soybean | nucleus | 15.62 | 12.22 |
Protein Annotations
EntrezGene:100805192 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02006696 | EnsemblPlantsGene:GLYMA_10G257400 | GO:GO:0001046 |
GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7LLF6 | ProteinID:KRH35667.1 |
EnsemblPlants:KRH35668 | ProteinID:KRH35668 | ProteinID:KRH35668.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
PANTHER:PTHR16223:SF101 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233CC6E | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:48381395..48384173
Molecular Weight (calculated)
38545.7 Da
IEP (calculated)
4.631
GRAVY (calculated)
-0.646
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVEQISEE WSSLSGFYTA EEANFMSQLL GNCSLPENLC GNFNLGIPSA IWPGHESTIV SVTGINESPY FHANGDNNNN NYLCFSQGSS STADSSNIFP
101: TTSGNSYTLN DPVANIGYMS TDFANLGPCN VQGSDSQQLN ENTHEELGLE VIADKKLQDR QECEVLVSEA AEEDINTNLE KSGKRSRCSM QVRKSKKNVK
201: PVKKPKSDSI SNSEEGRSPH LQGCCSENDD SSASQELNGG GSSSLSLEDS TSLKLKGKKS TANRGSATDP QSVYARRRRE RINERLKILQ NLVPNGTKVD
301: ISTMLEEAVQ YVKFLQLQIK LLSSDDLWMY SPIAYNGMNI GLDLNITPTK QP
101: TTSGNSYTLN DPVANIGYMS TDFANLGPCN VQGSDSQQLN ENTHEELGLE VIADKKLQDR QECEVLVSEA AEEDINTNLE KSGKRSRCSM QVRKSKKNVK
201: PVKKPKSDSI SNSEEGRSPH LQGCCSENDD SSASQELNGG GSSSLSLEDS TSLKLKGKKS TANRGSATDP QSVYARRRRE RINERLKILQ NLVPNGTKVD
301: ISTMLEEAVQ YVKFLQLQIK LLSSDDLWMY SPIAYNGMNI GLDLNITPTK QP
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.