Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99632 | Sorghum | nucleus | 70.85 | 74.11 |
| Zm00001d006733_P001 | Maize | nucleus | 69.49 | 71.68 |
| Zm00001d021988_P001 | Maize | nucleus | 71.19 | 71.19 |
| PGSC0003DMT400008370 | Potato | nucleus | 31.19 | 46.46 |
| PGSC0003DMT400089728 | Potato | nucleus | 36.95 | 35.74 |
| Solyc10g049780.1.1 | Tomato | nucleus | 32.88 | 35.66 |
| Solyc10g049720.1.1 | Tomato | nucleus | 34.92 | 34.56 |
| Solyc01g107140.1.1 | Tomato | nucleus | 37.63 | 33.64 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 35.59 | 33.23 |
| Os12t0589000-00 | Rice | nucleus | 34.24 | 33.22 |
| PGSC0003DMT400087143 | Potato | nucleus | 37.29 | 33.03 |
| VIT_03s0091g00730.t01 | Wine grape | nucleus | 38.98 | 32.86 |
| KRG91108 | Soybean | nucleus | 38.64 | 32.29 |
| Os03t0205300-00 | Rice | nucleus | 37.29 | 32.26 |
| KRH35668 | Soybean | nucleus | 38.31 | 32.1 |
| Bra034587.1-P | Field mustard | nucleus | 37.29 | 31.79 |
| Bra011476.1-P | Field mustard | nucleus | 37.29 | 31.7 |
| AT4G33880.1 | Thale cress | nucleus | 36.61 | 30.68 |
| KRH35669 | Soybean | nucleus | 36.95 | 30.45 |
| Bra036969.1-P | Field mustard | nucleus | 35.93 | 30.29 |
| KRH15444 | Soybean | nucleus | 35.93 | 30.29 |
| AT2G14760.3 | Thale cress | nucleus | 34.92 | 30.21 |
| KRH05600 | Soybean | nucleus | 35.93 | 30.03 |
| KRG91107 | Soybean | nucleus | 35.59 | 29.33 |
| Bra039819.1-P | Field mustard | nucleus | 33.9 | 28.9 |
| CDY48431 | Canola | nucleus | 26.1 | 23.99 |
| Os11t0634700-00 | Rice | extracellular | 27.12 | 22.28 |
| Os02t0710300-01 | Rice | nucleus | 22.03 | 21.67 |
| Os01t0111500-01 | Rice | nucleus | 20.34 | 20.34 |
| Os01t0831000-01 | Rice | nucleus | 12.2 | 16.74 |
| Os06t0496400-01 | Rice | nucleus | 16.61 | 16.67 |
| Os09t0455300-01 | Rice | nucleus | 13.22 | 16.53 |
| Os08t0108500-01 | Rice | nucleus | 15.25 | 14.71 |
| Os01t0707500-01 | Rice | nucleus | 14.58 | 10.94 |
| Os05t0541400-00 | Rice | nucleus | 14.92 | 10.58 |
| Os01t0566800-00 | Rice | nucleus | 15.25 | 9.66 |
Protein Annotations
| EntrezGene:107275987 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A0P0X817 | ProteinID:BAT02415.1 | GO:GO:0001046 |
| GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os07g0588400 | EnsemblPlants:Os07t0588400-00 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF61 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0003938C86 | RefSeq:XP_015646227.1 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
basic helix-loop-helix protein 128, ROOT HAIR DEFECTIVE-SIX LIKE 6Similar to basic helix-loop-helix protein / bHLH protein. (Os07t0588400-00)
Coordinates
chr7:-:23957016..23958316
Molecular Weight (calculated)
32189.7 Da
IEP (calculated)
5.600
GRAVY (calculated)
-0.507
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSYTSAVP LIEADAMAQF LGAHGDHCFT YEQMDESMEA MAAMFLPGLD TDSNSSSGCL NYDVPPQCWP QHGHSSSVTS FPDPAHSYGS FEFPVMDPFP
101: IADLDAHCAI PYLTEDLISP PHGNHPSARV EEATKVVTPV ATKRKSSAAM TASKKSKKAG KKDPIGSDEG GNTYIDTQSS SSCTSEEGNL EGNAKPSSKK
201: MGTRANRGAA TDPQSLYARK RRERINERLR ILQNLVPNGT KVDISTMLEE AVQYVKFLQL QIKLLSSDDT WMYAPIAYNG VNISNIDLNI SSLQK
101: IADLDAHCAI PYLTEDLISP PHGNHPSARV EEATKVVTPV ATKRKSSAAM TASKKSKKAG KKDPIGSDEG GNTYIDTQSS SSCTSEEGNL EGNAKPSSKK
201: MGTRANRGAA TDPQSLYARK RRERINERLR ILQNLVPNGT KVDISTMLEE AVQYVKFLQL QIKLLSSDDT WMYAPIAYNG VNISNIDLNI SSLQK
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.