Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15444 | Soybean | nucleus | 88.39 | 89.14 |
| KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 20.96 | 79.57 |
| KRH61404 | Soybean | nucleus | 42.78 | 45.48 |
| VIT_03s0091g00730.t01 | Wine grape | nucleus | 41.08 | 41.43 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 36.26 | 40.51 |
| EER99632 | Sorghum | nucleus | 30.59 | 38.3 |
| Zm00001d006733_P001 | Maize | nucleus | 29.46 | 36.36 |
| Zm00001d021988_P001 | Maize | nucleus | 30.31 | 36.27 |
| Os07t0588400-00 | Rice | nucleus | 30.03 | 35.93 |
| Bra034587.1-P | Field mustard | nucleus | 34.56 | 35.26 |
| AT4G33880.1 | Thale cress | nucleus | 34.84 | 34.94 |
| CDX69011 | Canola | nucleus | 33.99 | 34.58 |
| AT2G14760.3 | Thale cress | nucleus | 33.14 | 34.31 |
| Bra036969.1-P | Field mustard | nucleus | 33.99 | 34.29 |
| CDX72435 | Canola | nucleus | 33.99 | 34.29 |
| CDY28328 | Canola | nucleus | 34.56 | 34.27 |
| CDY49379 | Canola | nucleus | 33.71 | 34.0 |
| Bra011476.1-P | Field mustard | nucleus | 33.14 | 33.72 |
| CDX75386 | Canola | nucleus | 33.14 | 33.72 |
| CDY37221 | Canola | nucleus | 32.86 | 33.53 |
| CDX81461 | Canola | nucleus | 32.86 | 33.53 |
| Bra039819.1-P | Field mustard | nucleus | 32.86 | 33.53 |
| KRH35669 | Soybean | nucleus | 33.14 | 32.68 |
| KRG91107 | Soybean | nucleus | 32.86 | 32.4 |
| KRG91108 | Soybean | nucleus | 30.59 | 30.59 |
| KRH35668 | Soybean | nucleus | 30.31 | 30.4 |
| CDY48431 | Canola | nucleus | 24.65 | 27.1 |
| KRH00301 | Soybean | nucleus, plastid | 11.33 | 22.73 |
| KRH49427 | Soybean | nucleus, plastid | 11.05 | 22.16 |
| KRH53884 | Soybean | nucleus | 14.16 | 21.37 |
| KRH15121 | Soybean | nucleus | 17.56 | 21.16 |
| KRH64060 | Soybean | nucleus | 14.45 | 20.99 |
| KRH65648 | Soybean | nucleus, plastid | 10.76 | 20.88 |
| KRH73015 | Soybean | nucleus | 17.0 | 20.34 |
| KRH75991 | Soybean | nucleus, plastid | 9.92 | 19.66 |
| KRH28464 | Soybean | nucleus | 12.75 | 18.59 |
| KRH57944 | Soybean | nucleus | 13.31 | 18.5 |
| KRH59559 | Soybean | nucleus | 13.88 | 18.42 |
| KRH77007 | Soybean | nucleus | 12.75 | 17.93 |
| KRH43543 | Soybean | nucleus | 13.31 | 17.34 |
| KRG97923 | Soybean | nucleus | 16.43 | 17.11 |
| KRH30960 | Soybean | nucleus | 16.43 | 17.11 |
| KRH52010 | Soybean | nucleus | 12.18 | 16.67 |
| KRH04603 | Soybean | nucleus | 13.03 | 16.31 |
| KRH61303 | Soybean | nucleus | 11.9 | 15.91 |
| KRH44227 | Soybean | nucleus | 18.41 | 14.67 |
| KRH47179 | Soybean | nucleus | 17.85 | 14.62 |
| KRH09982 | Soybean | nucleus | 18.41 | 14.61 |
| KRH23349 | Soybean | nucleus | 18.13 | 14.22 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02010760 | EnsemblPlantsGene:GLYMA_17G236100 | GO:GO:0001046 | GO:GO:0001228 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7MNL7 | EnsemblPlants:KRH05600 | ProteinID:KRH05600 |
| ProteinID:KRH05600.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF105 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000233E4ED | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:+:39111396..39114116
Molecular Weight (calculated)
39407.5 Da
IEP (calculated)
4.669
GRAVY (calculated)
-0.708
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVGAFPDG EWDCFRRIFA SDEEHEHDLF TPQFPLLFDG DDGLNIVTQH TFCAAPEAGE NACMFYSLDA DHNSNSSQYI SQESSYSNTS SNCSGDDTVF
101: IANPGNANYY FSYPDHVLAN NNACVYSMDE KFFASFVPSI SDIVTEESAK LYKDVGSDKL ENSQCNQMEP IVFPTKQLQL KRKLDVPAED KINKGSENQK
201: KKARVSKDGQ GCMKNTWSKK NQKHTSNGEE AEETNTGLDG QSCSSNMSED DNTSKSALNS NGKTRASRGS ATDPQSLYAR KRRERINERL RILQNLVPNG
301: TKVDISTMLE EAVNYVKFLQ LQIKLLSSDD LWMYAPFAHN GLDIGLNLNS LPL
101: IANPGNANYY FSYPDHVLAN NNACVYSMDE KFFASFVPSI SDIVTEESAK LYKDVGSDKL ENSQCNQMEP IVFPTKQLQL KRKLDVPAED KINKGSENQK
201: KKARVSKDGQ GCMKNTWSKK NQKHTSNGEE AEETNTGLDG QSCSSNMSED DNTSKSALNS NGKTRASRGS ATDPQSLYAR KRRERINERL RILQNLVPNG
301: TKVDISTMLE EAVNYVKFLQ LQIKLLSSDD LWMYAPFAHN GLDIGLNLNS LPL
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.