Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G66470.1 | KRH14475 | AT2G42870.1 | 21798944 |
| AT1G66470.1 | KRH73670 | AT2G42870.1 | 21798944 |
| AT1G66470.1 | KRH04244 | AT5G47100.1 | 21798944 |
| AT1G66470.1 | KRH28207 | AT5G47100.1 | 21798944 |
| AT1G66470.1 | KRH57533 | AT5G47100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73015 | Soybean | nucleus | 92.15 | 91.53 |
| GSMUA_Achr3P01250_001 | Banana | cytosol, nucleus, plastid | 27.3 | 66.12 |
| KRG97923 | Soybean | nucleus | 69.28 | 59.88 |
| KRH30960 | Soybean | nucleus | 67.24 | 58.11 |
| VIT_14s0006g01470.t01 | Wine grape | nucleus | 51.54 | 43.52 |
| KRH52087 | Soybean | cytosol, mitochondrion, nucleus | 13.65 | 43.01 |
| CDX68049 | Canola | nucleus | 41.98 | 42.41 |
| CDX96145 | Canola | nucleus | 41.98 | 42.41 |
| CDY11694 | Canola | nucleus | 41.98 | 42.41 |
| CDY55674 | Canola | nucleus | 41.98 | 42.41 |
| AT5G37800.1 | Thale cress | nucleus | 41.98 | 40.07 |
| Solyc02g091440.1.1 | Tomato | nucleus | 43.34 | 40.06 |
| PGSC0003DMT400078776 | Potato | nucleus | 43.34 | 40.06 |
| AT1G66470.1 | Thale cress | nucleus | 40.61 | 39.93 |
| CDY61813 | Canola | nucleus | 41.3 | 39.67 |
| CDY58387 | Canola | nucleus | 41.3 | 39.41 |
| Bra019708.1-P | Field mustard | nucleus | 40.96 | 39.09 |
| GSMUA_Achr10P... | Banana | nucleus | 38.57 | 37.92 |
| Bra004169.1-P | Field mustard | nucleus | 34.47 | 37.69 |
| TraesCS3A01G006300.1 | Wheat | cytosol, nucleus, plastid | 34.47 | 36.86 |
| GSMUA_Achr2P22860_001 | Banana | nucleus | 40.27 | 36.65 |
| TraesCS3B01G010400.1 | Wheat | nucleus | 34.13 | 36.5 |
| TraesCS3B01G007700.1 | Wheat | nucleus | 34.13 | 36.5 |
| TraesCS3D01G004300.1 | Wheat | cytosol, nucleus, plastid | 33.79 | 36.0 |
| Zm00001d017804_P001 | Maize | nucleus | 34.47 | 34.24 |
| Os02t0710300-01 | Rice | nucleus | 34.47 | 33.67 |
| EES07381 | Sorghum | nucleus | 34.81 | 33.33 |
| TraesCS6A01G276100.1 | Wheat | nucleus | 33.11 | 33.33 |
| TraesCS6D01G256500.1 | Wheat | cytosol | 32.08 | 33.22 |
| EES00435 | Sorghum | nucleus | 32.76 | 33.1 |
| TraesCS6B01G303500.1 | Wheat | nucleus | 32.08 | 32.87 |
| TraesCS6D01G256300.1 | Wheat | nucleus | 32.76 | 32.65 |
| TraesCS6D01G256600.1 | Wheat | nucleus | 32.08 | 32.53 |
| TraesCS6B01G303600.1 | Wheat | cytosol, nucleus, plastid | 31.4 | 32.39 |
| TraesCS6A01G276200.1 | Wheat | cytosol, nucleus, plastid | 31.74 | 32.18 |
| GSMUA_Achr6P09370_001 | Banana | nucleus | 37.2 | 32.15 |
| Zm00001d008444_P001 | Maize | nucleus | 34.81 | 31.38 |
| TraesCS6D01G256400.1 | Wheat | nucleus | 29.35 | 31.27 |
| Os01t0111500-01 | Rice | nucleus | 30.72 | 30.51 |
| TraesCS7A01G229900.1 | Wheat | nucleus | 29.35 | 30.18 |
| TraesCS7D01G230600.1 | Wheat | nucleus | 29.35 | 30.07 |
| TraesCS7B01G195800.1 | Wheat | nucleus | 29.69 | 29.79 |
| Os06t0496400-01 | Rice | nucleus | 26.62 | 26.53 |
| HORVU7Hr1G046580.1 | Barley | plasma membrane, vacuole | 29.69 | 26.28 |
| KRH49427 | Soybean | nucleus, plastid | 14.68 | 24.43 |
| KRH00301 | Soybean | nucleus, plastid | 14.33 | 23.86 |
| KRH65648 | Soybean | nucleus, plastid | 14.68 | 23.63 |
| KRH75991 | Soybean | nucleus, plastid | 13.99 | 23.03 |
| KRH28464 | Soybean | nucleus | 15.7 | 19.01 |
| KRH15444 | Soybean | nucleus | 21.5 | 18.0 |
| KRH77007 | Soybean | nucleus | 15.36 | 17.93 |
| KRH57944 | Soybean | nucleus | 15.36 | 17.72 |
| KRH64060 | Soybean | nucleus | 14.68 | 17.7 |
| KRH05600 | Soybean | nucleus | 21.16 | 17.56 |
| KRH61404 | Soybean | nucleus | 19.8 | 17.47 |
| KRH35668 | Soybean | nucleus | 20.82 | 17.33 |
| KRH35669 | Soybean | nucleus | 21.16 | 17.32 |
| KRH53884 | Soybean | nucleus | 13.65 | 17.09 |
| KRH59559 | Soybean | nucleus | 15.02 | 16.54 |
| KRG91107 | Soybean | nucleus | 20.14 | 16.48 |
| KRG91108 | Soybean | nucleus | 19.45 | 16.15 |
| KRH61303 | Soybean | nucleus | 14.33 | 15.91 |
| KRH43543 | Soybean | nucleus | 14.68 | 15.87 |
| KRH04603 | Soybean | nucleus | 15.02 | 15.6 |
| KRH52010 | Soybean | nucleus | 13.65 | 15.5 |
| KRH09982 | Soybean | nucleus | 16.04 | 10.56 |
| KRH23349 | Soybean | nucleus | 16.04 | 10.44 |
| KRH47179 | Soybean | nucleus | 14.68 | 9.98 |
| KRH44227 | Soybean | nucleus | 14.68 | 9.71 |
Protein Annotations
| EntrezGene:106795957 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02008563 | EnsemblPlantsGene:GLYMA_14G069700 | GO:GO:0001046 |
| GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1M867 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH15121 |
| ProteinID:KRH15121 | ProteinID:KRH15121.1 | EMBL:KT031123 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF19 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00023D4A8F | InterPro:bHLH_dom | : |
Description
hypothetical protein
Coordinates
chr14:-:5843959..5845791
Molecular Weight (calculated)
32483.9 Da
IEP (calculated)
6.255
GRAVY (calculated)
-0.624
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSLTSNGV NEYQKCVVEE EDGSQSTNGL SNDSASAITN SPPLCGNEYV HKSTHYQLEE AESLINFKAN DQYNNLMQGS ESFLSFQQSW MFSKESNLHE
101: GYNQWNHVIS PKSPTDMRLV QNFSCFETAT GYSSIFNGAK DKQHGESSSS GWLYSEPNVP SDSLHESAAQ ELVLKKRSFM GENMQVTNAK KPCTSASKAA
201: KPKSNPSQDP QSVAAKNRRE RISERLKILQ ELVPNGSKVD LVTMLEKAIS YVKFLQLQVK VLAADEFWPV QGGKAPDISQ VRQAIDAILS SQR
101: GYNQWNHVIS PKSPTDMRLV QNFSCFETAT GYSSIFNGAK DKQHGESSSS GWLYSEPNVP SDSLHESAAQ ELVLKKRSFM GENMQVTNAK KPCTSASKAA
201: KPKSNPSQDP QSVAAKNRRE RISERLKILQ ELVPNGSKVD LVTMLEKAIS YVKFLQLQVK VLAADEFWPV QGGKAPDISQ VRQAIDAILS SQR
001: MSLINEHCNE RNYISTPNSS EDLSSPQNCG LDEGASASSS STINSDHQNN QGFVFYPSGE TIEDHNSLMD FNASSFFTFD NHRSLISPVT NGGAFPVVDG
101: NMSYSYDGWS HHQVDSISPR VIKTPNSFET TSSFGLTSNS MSKPATNHGN GDWLYSGSTI VNIGSRHEST SPKLAGNKRP FTGENTQLSK KPSSGTNGKI
201: KPKATTSPKD PQSLAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAI GYVKFLQVQV KVLAADEFWP AQGGKAPDIS QVKEAIDAIL SSSQRDSNST
301: RETSIAE
101: NMSYSYDGWS HHQVDSISPR VIKTPNSFET TSSFGLTSNS MSKPATNHGN GDWLYSGSTI VNIGSRHEST SPKLAGNKRP FTGENTQLSK KPSSGTNGKI
201: KPKATTSPKD PQSLAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAI GYVKFLQVQV KVLAADEFWP AQGGKAPDIS QVKEAIDAIL SSSQRDSNST
301: RETSIAE
Arabidopsis Description
BHLH86RSL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.