CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44227	Soybean	nucleus	90.95	88.49
KRH09982	Soybean	nucleus	67.29	65.17
KRH23349	Soybean	nucleus	67.75	64.89
Bra001826.1-P	Field mustard	nucleus	38.05	50.62
CDY32423	Canola	nucleus	38.75	50.61
GSMUA_Achr1P14400_001	Banana	nucleus	19.49	50.3
CDY62045	Canola	nucleus	38.98	50.15
CDY51449	Canola	nucleus	38.28	49.7
Bra031275.1-P	Field mustard	nucleus	38.28	49.7
VIT_09s0002g02700.t01	Wine grape	nucleus	53.6	49.04
CDY48884	Canola	nucleus	38.05	48.96
AT3G21330.1	Thale cress	nucleus	40.37	46.65
PGSC0003DMT400006453	Potato	nucleus	36.66	40.93
Solyc03g121240.1.1	Tomato	nucleus	35.96	40.79
GSMUA_AchrUn_...	Banana	nucleus	24.59	38.83
GSMUA_Achr8P24970_001	Banana	nucleus	31.32	38.79
KRH52087	Soybean	cytosol, mitochondrion, nucleus	7.89	36.56
KRH28464	Soybean	nucleus	18.33	32.64
KRH77007	Soybean	nucleus	18.56	31.87
KRH53884	Soybean	nucleus	17.17	31.62
GSMUA_Achr3P25950_001	Banana	nucleus	25.75	31.53
KRH64060	Soybean	nucleus	17.4	30.86
KRH52010	Soybean	nucleus	18.33	30.62
KRH57944	Soybean	nucleus	17.87	30.32
KRH61303	Soybean	nucleus	18.56	30.3
KRH04603	Soybean	nucleus	19.03	29.08
KXG33221	Sorghum	nucleus	28.07	28.95
TraesCS3A01G252200.1	Wheat	nucleus	25.52	28.5
EES18589	Sorghum	nucleus	26.22	28.18
TraesCS3B01G281600.1	Wheat	nucleus	24.83	28.16
TraesCS1A01G362800.1	Wheat	nucleus	25.75	28.1
Os01t0707500-01	Rice	nucleus	25.52	27.99
TraesCS3D01G252700.1	Wheat	nucleus	25.06	27.98
HORVU3Hr1G066600.2	Barley	nucleus	25.99	27.65
Zm00001d043699_P001	Maize	nucleus	26.91	27.49
KRH43543	Soybean	nucleus	17.17	27.31
TraesCS1D01G367700.1	Wheat	nucleus	25.29	27.18
Zm00001d011187_P001	Maize	nucleus	26.91	26.98
TraesCS1B01G380000.1	Wheat	nucleus	24.83	26.88
HORVU1Hr1G079450.1	Barley	nucleus	24.83	26.75
Zm00001d038863_P001	Maize	nucleus	24.36	26.52
KRH59559	Soybean	nucleus	16.24	26.32
Os01t0566800-00	Rice	nucleus	27.61	25.54
KRH75991	Soybean	nucleus, plastid	10.44	25.28
KRH65648	Soybean	nucleus, plastid	10.67	25.27
Os05t0541400-00	Rice	nucleus	23.9	24.76
Zm00001d044242_P001	Maize	nucleus	27.38	24.53
KRH00301	Soybean	nucleus, plastid	9.98	24.43
KRH49427	Soybean	nucleus, plastid	9.51	23.3
OQU87026	Sorghum	nucleus	24.83	23.21
TraesCS3A01G207300.2	Wheat	extracellular	24.83	22.91
TraesCS3B01G233700.2	Wheat	extracellular, mitochondrion, nucleus, plastid	24.83	22.81
TraesCS3D01G208500.2	Wheat	mitochondrion	25.06	22.78
HORVU3Hr1G048770.1	Barley	plastid	25.29	22.61
KRH61404	Soybean	nucleus	14.85	19.28
KRH05600	Soybean	nucleus	14.62	17.85
KRH15444	Soybean	nucleus	14.15	17.43
KRH35668	Soybean	nucleus	13.69	16.76
KRH35669	Soybean	nucleus	13.69	16.48
KRG91107	Soybean	nucleus	13.69	16.48
KRG91108	Soybean	nucleus	13.23	16.15
KRH15121	Soybean	nucleus	9.98	14.68
KRH73015	Soybean	nucleus	9.28	13.56
KRG97923	Soybean	nucleus	9.98	12.68
KRH30960	Soybean	nucleus	9.98	12.68

Protein Annotations

EntrezGene:100793975	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02004138	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G013600
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7KZ03	EnsemblPlants:KRH47179	ProteinID:KRH47179	ProteinID:KRH47179.1	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF293	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002337D95
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:1054505..1056676

Molecular Weight (calculated)

47137.0 Da

IEP (calculated)

5.261

GRAVY (calculated)

-0.558

Length

431 amino acids

Sequence
(BLAST)

001: MDGLSWDASQ LWGTIQQPPV FGGGYSMPLN VLNQIQEMQK AQTGHVFSNS ERAIYQSAGA TTTSSEIMDV MQKQDKNLSQ HVSTMPVKPG AGASWGETLT
101: SQSYPSLSVN GPHSMNLISN YTPDFNMAHH QQLVNGSQNG KGGCSLEPFD CLISATNSNT DTSVEDDDGI SMILSDCGNL WNNFSYGSVA STGESESNAS
201: NGRNKDMQCP VNEVDETVSQ TVESEANCSK RSHDQSKMIQ VGDSCFSIVQ NSSPIEEGGF RLISDNPPEC KKPRWDMSSS SNNINFQQPN SSISSSIEEP
301: DPEAIAQMKE MIYRAAAFRP VNFGLEVVEK LKRKNVKIST DPQTVAARHR RERISEKIRV LQKLVPGGSK MDTASMLDEA ANYLKFLRSQ VKALESLGNK
401: VDAMNCPPTS IAFSFNPSFP MQTPLSHIHH S

Best Arabidopsis Sequence Match ( AT3G21330.1 )
(BLAST)

001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC

Arabidopsis Description

BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.