Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G252200.1 | Wheat | nucleus | 96.37 | 96.37 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 92.49 | 93.95 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 91.45 | 87.16 |
| Os01t0707500-01 | Rice | nucleus | 63.47 | 62.34 |
| KXG33221 | Sorghum | nucleus | 61.14 | 56.46 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 24.35 | 56.29 |
| Zm00001d043699_P001 | Maize | nucleus | 58.55 | 53.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.57 | 43.22 |
| TraesCS1D01G367700.1 | Wheat | nucleus | 41.71 | 40.15 |
| TraesCS7D01G263400.1 | Wheat | nucleus | 17.88 | 31.36 |
| Bra001826.1-P | Field mustard | nucleus | 26.17 | 31.17 |
| CDY32423 | Canola | nucleus | 26.42 | 30.91 |
| TraesCS7D01G170900.1 | Wheat | nucleus | 14.77 | 30.81 |
| CDY51449 | Canola | nucleus | 26.42 | 30.72 |
| Bra031275.1-P | Field mustard | nucleus | 26.42 | 30.72 |
| TraesCS5D01G244000.1 | Wheat | nucleus | 18.65 | 30.64 |
| CDY62045 | Canola | nucleus | 26.42 | 30.45 |
| CDY48884 | Canola | nucleus | 25.39 | 29.25 |
| PGSC0003DMT400006453 | Potato | nucleus | 29.02 | 29.02 |
| Solyc03g121240.1.1 | Tomato | nucleus | 27.98 | 28.42 |
| AT3G21330.1 | Thale cress | nucleus | 26.42 | 27.35 |
| KRH09982 | Soybean | nucleus | 29.53 | 25.62 |
| KRH23349 | Soybean | nucleus | 29.79 | 25.56 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 30.83 | 25.27 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 30.83 | 25.11 |
| KRH47179 | Soybean | nucleus | 27.98 | 25.06 |
| KRH44227 | Soybean | nucleus | 28.24 | 24.61 |
| TraesCS3D01G344600.1 | Wheat | nucleus | 12.69 | 23.0 |
| TraesCS7D01G319600.1 | Wheat | nucleus | 18.13 | 22.08 |
| TraesCS1D01G347900.1 | Wheat | nucleus | 9.33 | 19.35 |
| TraesCS5D01G078800.1 | Wheat | nucleus | 12.69 | 16.95 |
| TraesCS3D01G004300.1 | Wheat | cytosol, nucleus, plastid | 11.92 | 16.73 |
| TraesCS6D01G256600.1 | Wheat | nucleus | 12.18 | 16.26 |
| TraesCS7D01G230600.1 | Wheat | nucleus | 11.92 | 16.08 |
| TraesCS3D01G433200.1 | Wheat | nucleus | 10.36 | 15.69 |
| TraesCS6D01G256300.1 | Wheat | nucleus | 11.92 | 15.65 |
| TraesCS6D01G256400.1 | Wheat | nucleus | 11.14 | 15.64 |
| TraesCS6D01G256500.1 | Wheat | cytosol | 11.14 | 15.19 |
| TraesCS4D01G079500.1 | Wheat | nucleus | 11.92 | 14.7 |
| TraesCS5D01G411600.1 | Wheat | nucleus | 11.14 | 14.33 |
| TraesCS2D01G193700.1 | Wheat | nucleus | 11.14 | 14.24 |
| TraesCS4D01G257100.1 | Wheat | nucleus | 11.4 | 13.29 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G252700.1 | EnsemblPlantsGene:TraesCS3D01G252700 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF288 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 | TIGR:cd00083 |
| MapMan:15.5.32 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:354073171..354074497
Molecular Weight (calculated)
39748.3 Da
IEP (calculated)
7.910
GRAVY (calculated)
-0.262
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTFGWSGPG LHDDAYLPRP VSQLSCGRFD LDDAFLGQLQ CDFGGGGQVS SSYGAAVGGA AVNNGPLGFF GSGVDVFSSV VDGASAHDGL LDSALAFSSV
101: LPCGGEGDPG AVSNGAMFSG YSGTTVCNIS SGESNNYSGG GGGHDVTEVA SPTSTISPTT TSHPTITSAQ QVLHVSRKLP ADDCPAAATV PPLPRAGTKR
201: KSPTTTATSI TFGQDTNTGA AGGYKPDMEA MAQVKEMIYR AAAMRPVNLV TEPPAAGSSK PRRKNVRISS DPQTVAARLR RERVSDRLRV LQKLVPGGSK
301: MDTASMLDEA ASYLKFLKSQ VQALETLGTT SSTGASAAAA ASTGRLQLHS QLHYYSNNPG FLGFARNNNN ISSAFRNPNG NSARLL
101: LPCGGEGDPG AVSNGAMFSG YSGTTVCNIS SGESNNYSGG GGGHDVTEVA SPTSTISPTT TSHPTITSAQ QVLHVSRKLP ADDCPAAATV PPLPRAGTKR
201: KSPTTTATSI TFGQDTNTGA AGGYKPDMEA MAQVKEMIYR AAAMRPVNLV TEPPAAGSSK PRRKNVRISS DPQTVAARLR RERVSDRLRV LQKLVPGGSK
301: MDTASMLDEA ASYLKFLKSQ VQALETLGTT SSTGASAAAA ASTGRLQLHS QLHYYSNNPG FLGFARNNNN ISSAFRNPNG NSARLL
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.