Factsheet for TraesCS7D01G170900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G074900.1	Wheat	nucleus	90.27	90.76
TraesCS7A01G169700.1	Wheat	cytosol	87.57	90.5
HORVU0Hr1G019640.1	Barley	cytosol	89.19	88.71
GSMUA_Achr8P23350_001	Banana	nucleus	32.43	38.71
TraesCS7D01G263400.1	Wheat	nucleus	36.22	30.45
TraesCS5D01G244000.1	Wheat	nucleus	36.76	28.94
TraesCS3D01G344600.1	Wheat	nucleus	25.95	22.54
TraesCS7D01G319600.1	Wheat	nucleus	31.35	18.3
TraesCS1D01G347900.1	Wheat	nucleus	17.84	17.74
TraesCS3D01G252700.1	Wheat	nucleus	30.81	14.77
TraesCS1D01G367700.1	Wheat	nucleus	31.35	14.46
TraesCS3D01G433200.1	Wheat	nucleus	19.46	14.12
TraesCS5D01G078800.1	Wheat	nucleus	20.54	13.15
TraesCS6D01G256600.1	Wheat	nucleus	18.38	11.76
TraesCS2D01G193700.1	Wheat	nucleus	18.92	11.59
TraesCS5D01G411600.1	Wheat	nucleus	18.38	11.33
TraesCS7D01G230600.1	Wheat	nucleus	17.3	11.19
TraesCS3D01G208500.2	Wheat	mitochondrion	28.11	10.97
TraesCS6D01G256400.1	Wheat	nucleus	16.22	10.91
TraesCS3D01G004300.1	Wheat	cytosol, nucleus, plastid	16.22	10.91
TraesCS4D01G079500.1	Wheat	nucleus	18.38	10.86
TraesCS6D01G256500.1	Wheat	cytosol	16.22	10.6
TraesCS6D01G256300.1	Wheat	nucleus	16.76	10.54
TraesCS4D01G257100.1	Wheat	nucleus	17.3	9.67

Protein Annotations

EnsemblPlants:TraesCS7D01G170900.1	EnsemblPlantsGene:TraesCS7D01G170900	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF303	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:123219306..123219863

Molecular Weight (calculated)

20253.3 Da

IEP (calculated)

9.806

GRAVY (calculated)

-0.410

Length

185 amino acids

Sequence
(BLAST)

001: MDLDTGMDMT NQEQLMRTIS QLDSALTYLS SPSTSPPHQP PVLVLPYPSC ATGAVTPSVV TMPVSVPPPA AGYPEHTGTR RLVVGIQSAG DVERPRRRNG
101: RVSSEPQSVA ARLRRERVSQ RMRALQRLVP GGARLDTASM LEEAVRYVRF LKSHVQALEQ AAAALHGRRE DVAGGDFYHH CPRYA

Best Arabidopsis Sequence Match ( AT3G21330.1 )
(BLAST)

001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC

Arabidopsis Description

BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.