Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 93.88 | 94.88 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 93.04 | 94.43 |
| HORVU3Hr1G048770.1 | Barley | plastid | 87.34 | 85.89 |
| Zm00001d011187_P001 | Maize | nucleus | 56.54 | 62.33 |
| Os01t0566800-00 | Rice | nucleus | 60.34 | 61.37 |
| OQU87026 | Sorghum | nucleus | 53.8 | 55.31 |
| Zm00001d044242_P001 | Maize | nucleus | 54.01 | 53.22 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 17.93 | 50.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.15 | 38.46 |
| TraesCS5D01G244000.1 | Wheat | nucleus | 15.61 | 31.49 |
| TraesCS7D01G263400.1 | Wheat | nucleus | 14.56 | 31.36 |
| Bra001826.1-P | Field mustard | nucleus | 21.31 | 31.17 |
| PGSC0003DMT400006453 | Potato | nucleus | 25.11 | 30.83 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 25.11 | 30.83 |
| CDY32423 | Canola | nucleus | 21.31 | 30.61 |
| Solyc03g121240.1.1 | Tomato | nucleus | 24.47 | 30.53 |
| CDY51449 | Canola | nucleus | 21.1 | 30.12 |
| Bra031275.1-P | Field mustard | nucleus | 21.1 | 30.12 |
| CDY62045 | Canola | nucleus | 20.89 | 29.55 |
| CDY48884 | Canola | nucleus | 20.68 | 29.25 |
| TraesCS1D01G367700.1 | Wheat | nucleus | 24.26 | 28.68 |
| TraesCS7D01G170900.1 | Wheat | nucleus | 10.97 | 28.11 |
| AT3G21330.1 | Thale cress | nucleus | 21.94 | 27.88 |
| KRH47179 | Soybean | nucleus | 22.78 | 25.06 |
| KRH09982 | Soybean | nucleus | 23.42 | 24.94 |
| KRH23349 | Soybean | nucleus | 23.63 | 24.89 |
| KRH44227 | Soybean | nucleus | 22.57 | 24.15 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 23.63 | 23.78 |
| TraesCS3D01G344600.1 | Wheat | nucleus | 10.55 | 23.47 |
| TraesCS7D01G319600.1 | Wheat | nucleus | 14.77 | 22.08 |
| TraesCS1D01G347900.1 | Wheat | nucleus | 7.81 | 19.89 |
| TraesCS3D01G433200.1 | Wheat | nucleus | 9.7 | 18.04 |
| TraesCS7D01G230600.1 | Wheat | nucleus | 9.92 | 16.43 |
| TraesCS3D01G004300.1 | Wheat | cytosol, nucleus, plastid | 9.07 | 15.64 |
| TraesCS6D01G256600.1 | Wheat | nucleus | 9.49 | 15.57 |
| TraesCS6D01G256500.1 | Wheat | cytosol | 9.28 | 15.55 |
| TraesCS6D01G256400.1 | Wheat | nucleus | 8.65 | 14.91 |
| TraesCS6D01G256300.1 | Wheat | nucleus | 9.07 | 14.63 |
| TraesCS2D01G193700.1 | Wheat | nucleus | 9.28 | 14.57 |
| TraesCS4D01G257100.1 | Wheat | nucleus | 10.13 | 14.5 |
| TraesCS5D01G078800.1 | Wheat | nucleus | 8.65 | 14.19 |
| TraesCS4D01G079500.1 | Wheat | nucleus | 9.28 | 14.06 |
| TraesCS5D01G411600.1 | Wheat | nucleus | 8.44 | 13.33 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G208500.2 | EnsemblPlantsGene:TraesCS3D01G208500 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF303 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:275636116..275637688
Molecular Weight (calculated)
49348.3 Da
IEP (calculated)
7.078
GRAVY (calculated)
-0.273
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPLLLQYIH TRASLPSPPA ASATAAECSP LPQLTCVPLI KVGAGKMDPG FCNDMILSES AWNSGGGDGG AAGDVVHVVD GSGMTVLERL VLDEALAAAI
101: MELQGIQVPC GGGKPMAGGL EAASLAFGAT GTGPVTPAYA EVDGVVLQRQ QHQHRHQGVM GMPADYDLVP AARAVTLATV PAAPSFPKGA AAAVDRAGVV
201: DAAVFDSGNN GPTSAAKTGT TRQWDEANGG AKRQRRSSRK RRAADAPCPA ADGHSQENPL CSILASTNTG DGGIQIAFSS GGGAASSSKR TKPSLSSTSS
301: SISFDGRSSV NNGCDDVPRY EPDTEALAQV KEMIYRAAAM RPVSLGVEEE DTGERPSRRN VRISSDPQTV AARQRRERIS ERLRVLQKLV PGGAKMDTAS
401: MLDEAANYLR FLKSQIRELQ TLDRRNYGAN AISNTGMAPL MSYNNMPAFA FPATGASETL GGGGEEAFMS SRFR
101: MELQGIQVPC GGGKPMAGGL EAASLAFGAT GTGPVTPAYA EVDGVVLQRQ QHQHRHQGVM GMPADYDLVP AARAVTLATV PAAPSFPKGA AAAVDRAGVV
201: DAAVFDSGNN GPTSAAKTGT TRQWDEANGG AKRQRRSSRK RRAADAPCPA ADGHSQENPL CSILASTNTG DGGIQIAFSS GGGAASSSKR TKPSLSSTSS
301: SISFDGRSSV NNGCDDVPRY EPDTEALAQV KEMIYRAAAM RPVSLGVEEE DTGERPSRRN VRISSDPQTV AARQRRERIS ERLRVLQKLV PGGAKMDTAS
401: MLDEAANYLR FLKSQIRELQ TLDRRNYGAN AISNTGMAPL MSYNNMPAFA FPATGASETL GGGGEEAFMS SRFR
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.