Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011187_P001 | Maize | nucleus | 77.87 | 83.49 |
| Zm00001d044242_P001 | Maize | nucleus | 74.62 | 71.52 |
| Os01t0566800-00 | Rice | nucleus | 63.12 | 62.45 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 55.31 | 53.8 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 54.01 | 53.32 |
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 54.01 | 53.09 |
| HORVU3Hr1G048770.1 | Barley | plastid | 52.93 | 50.62 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 15.62 | 43.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.96 | 33.7 |
| KXG33221 | Sorghum | nucleus | 26.25 | 28.95 |
| EES18589 | Sorghum | nucleus | 24.08 | 27.68 |
| Bra031275.1-P | Field mustard | nucleus | 19.52 | 27.11 |
| CDY51449 | Canola | nucleus | 19.52 | 27.11 |
| Solyc03g121240.1.1 | Tomato | nucleus | 22.34 | 27.11 |
| PGSC0003DMT400006453 | Potato | nucleus | 22.56 | 26.94 |
| CDY62045 | Canola | nucleus | 19.52 | 26.87 |
| Bra001826.1-P | Field mustard | nucleus | 18.87 | 26.85 |
| CDY32423 | Canola | nucleus | 18.87 | 26.36 |
| CDY48884 | Canola | nucleus | 18.66 | 25.67 |
| KRH47179 | Soybean | nucleus | 23.21 | 24.83 |
| AT3G21330.1 | Thale cress | nucleus | 19.96 | 24.66 |
| KRH44227 | Soybean | nucleus | 23.43 | 24.38 |
| KRH23349 | Soybean | nucleus | 23.43 | 24.0 |
| KRH09982 | Soybean | nucleus | 22.78 | 23.6 |
| EES15124 | Sorghum | nucleus | 13.67 | 23.42 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 23.43 | 22.93 |
| EER96848 | Sorghum | nucleus | 12.58 | 22.22 |
| EES14382 | Sorghum | nucleus | 13.02 | 17.24 |
| KXG39918 | Sorghum | nucleus | 10.2 | 14.6 |
| OQU83893 | Sorghum | nucleus | 7.59 | 14.46 |
| EER93400 | Sorghum | nucleus | 8.89 | 14.04 |
| EER99632 | Sorghum | nucleus | 8.24 | 13.48 |
| EES07381 | Sorghum | nucleus | 8.89 | 13.4 |
| OQU87789 | Sorghum | cytosol | 4.12 | 13.29 |
| EER91225 | Sorghum | nucleus | 8.46 | 13.0 |
| EES17296 | Sorghum | nucleus | 8.89 | 12.97 |
| EES00435 | Sorghum | nucleus | 8.03 | 12.76 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1W0VY07 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:OQU87026 |
| ProteinID:OQU87026 | ProteinID:OQU87026.1 | ProteinID:OQU87027.1 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF303 |
| SMART:SM00353 | EnsemblPlantsGene:SORBI_3003G191800 | SUPFAM:SSF47459 | UniParc:UPI0009DC83F9 | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:51321805..51323238
Molecular Weight (calculated)
46711.9 Da
IEP (calculated)
6.181
GRAVY (calculated)
-0.119
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHNFSDMIL RESAWSGGVV GAGDGGAVLL PPVEVVGNVV EGGSGMTVLE RLVLDEALAA AILELQGSIV HVQQQAPAAC CAGSKAVPAA GGGVVGEEAA
101: VAFPSMAMAT PTPAYADVDA DVLQRQQHHH RHHGAMGISM PPDYDLTPAT TPAVAVTAAA FTATAAVDSG GNNSLVVGRS PPPVFSASCN ETTATAAAVT
201: ATTSLSCEQG GGGGGAGGGK RQRRPNRKRK AAAERSPVAV AAAAAQESTL CSLLASGTTT AGEGGIQIAF STSAAKRSAK PSSLSSSGSS SISFDGRNNP
301: AGNGGGVEDS MYEPDTEALA QVKEMIYRAA AMRPVSLGSE DAGERPRRRN VRISERLRVL QKLVPGGAKM DTASMLDEAA NYLRFLKSQV RELQTLDRRN
401: YGATANNAND ATAAMAAVGS SSSLMSYNNG NGAMPFSFPA AGETLRGSVG GGLDRPADLV I
101: VAFPSMAMAT PTPAYADVDA DVLQRQQHHH RHHGAMGISM PPDYDLTPAT TPAVAVTAAA FTATAAVDSG GNNSLVVGRS PPPVFSASCN ETTATAAAVT
201: ATTSLSCEQG GGGGGAGGGK RQRRPNRKRK AAAERSPVAV AAAAAQESTL CSLLASGTTT AGEGGIQIAF STSAAKRSAK PSSLSSSGSS SISFDGRNNP
301: AGNGGGVEDS MYEPDTEALA QVKEMIYRAA AMRPVSLGSE DAGERPRRRN VRISERLRVL QKLVPGGAKM DTASMLDEAA NYLRFLKSQV RELQTLDRRN
401: YGATANNAND ATAAMAAVGS SSSLMSYNNG NGAMPFSFPA AGETLRGSVG GGLDRPADLV I
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.