Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d006733_P001 | Maize | nucleus | 86.88 | 85.66 |
Zm00001d021988_P001 | Maize | nucleus | 84.04 | 80.34 |
Os07t0588400-00 | Rice | nucleus | 74.11 | 70.85 |
PGSC0003DMT400008370 | Potato | nucleus | 32.27 | 45.96 |
PGSC0003DMT400089728 | Potato | nucleus | 39.36 | 36.39 |
Solyc10g049720.1.1 | Tomato | nucleus | 38.3 | 36.24 |
Solyc10g049780.1.1 | Tomato | nucleus | 34.4 | 35.66 |
OQU83893 | Sorghum | nucleus | 29.08 | 33.88 |
Solyc01g107140.1.1 | Tomato | nucleus | 39.36 | 33.64 |
GSMUA_Achr2P17130_001 | Banana | nucleus | 37.59 | 33.54 |
PGSC0003DMT400087143 | Potato | nucleus | 39.01 | 33.03 |
VIT_03s0091g00730.t01 | Wine grape | nucleus | 39.72 | 32.0 |
Bra034587.1-P | Field mustard | nucleus | 39.01 | 31.79 |
KRG91108 | Soybean | nucleus | 39.72 | 31.73 |
KXG39918 | Sorghum | nucleus | 36.17 | 31.68 |
KRH15444 | Soybean | nucleus | 39.01 | 31.43 |
EER91225 | Sorghum | nucleus | 32.98 | 31.0 |
KRH35668 | Soybean | nucleus | 38.65 | 30.97 |
Bra036969.1-P | Field mustard | nucleus | 38.3 | 30.86 |
Bra011476.1-P | Field mustard | nucleus | 37.94 | 30.84 |
EES17296 | Sorghum | nucleus | 34.4 | 30.7 |
KRH05600 | Soybean | nucleus | 38.3 | 30.59 |
AT4G33880.1 | Thale cress | nucleus | 37.94 | 30.4 |
KRH35669 | Soybean | nucleus | 37.94 | 29.89 |
AT2G14760.3 | Thale cress | nucleus | 35.46 | 29.33 |
KRG91107 | Soybean | nucleus | 36.52 | 28.77 |
EER93400 | Sorghum | nucleus | 29.43 | 28.42 |
Bra039819.1-P | Field mustard | nucleus | 34.75 | 28.32 |
CDY48431 | Canola | nucleus | 27.66 | 24.3 |
EES00435 | Sorghum | nucleus | 21.63 | 21.03 |
EES07381 | Sorghum | nucleus | 21.99 | 20.26 |
EES15124 | Sorghum | nucleus | 15.6 | 16.36 |
EER96848 | Sorghum | nucleus | 14.18 | 15.33 |
EES18589 | Sorghum | nucleus | 18.44 | 12.97 |
EES14382 | Sorghum | nucleus | 14.89 | 12.07 |
KXG33221 | Sorghum | nucleus | 16.67 | 11.24 |
OQU87789 | Sorghum | cytosol | 5.32 | 10.49 |
OQU87026 | Sorghum | nucleus | 13.48 | 8.24 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:8078980 | UniProt:C5XD43 | EnsemblPlants:EER99632 | ProteinID:EER99632 |
ProteinID:EER99632.1 | GO:GO:0001046 | GO:GO:0001228 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF99 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3002G359200 |
SUPFAM:SSF47459 | UniParc:UPI0001A83C35 | RefSeq:XP_002463111.1 | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:72142948..72144625
Molecular Weight (calculated)
31342.3 Da
IEP (calculated)
4.626
GRAVY (calculated)
-0.602
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIDMMAQFL GTDDHCFTYE YEHVDESMEA IAALFLPNLD TDSNSSSCLN FDVPPQCWPQ PDHSSSVTSL LDPTENFESF EFPVIDPFPA SGFDSHCETP
101: YLTEYPISLH GKHSSVIEEE AANVTPAAKK RKASATTKGS KKSRKVSKKD YIGDDDGGDA YVDTQSSSSC TSEDGNFEGN TNSSTKKAYT RASRGAATDP
201: QSLYARKRRE RINERLRILQ KLVPNGTKVD ISTMLEEAAQ YVKFLQLQIK LLSSDDTWMY APIAYNGINI SNVDLNIPSL QK
101: YLTEYPISLH GKHSSVIEEE AANVTPAAKK RKASATTKGS KKSRKVSKKD YIGDDDGGDA YVDTQSSSSC TSEDGNFEGN TNSSTKKAYT RASRGAATDP
201: QSLYARKRRE RINERLRILQ KLVPNGTKVD ISTMLEEAAQ YVKFLQLQIK LLSSDDTWMY APIAYNGINI SNVDLNIPSL QK
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.