Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P16890_001 | Banana | nucleus | 28.8 | 66.91 |
| GSMUA_Achr4P23240_001 | Banana | nucleus | 27.22 | 58.9 |
| PGSC0003DMT400008370 | Potato | nucleus | 31.01 | 49.49 |
| GSMUA_Achr6P07760_001 | Banana | nucleus | 39.24 | 43.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.24 | 41.47 |
| GSMUA_Achr3P18870_001 | Banana | nucleus | 45.25 | 41.33 |
| Solyc10g049780.1.1 | Tomato | nucleus | 35.13 | 40.81 |
| VIT_03s0091g00730.t01 | Wine grape | nucleus | 44.94 | 40.57 |
| GSMUA_Achr3P01250_001 | Banana | cytosol, nucleus, plastid | 15.51 | 40.5 |
| GSMUA_Achr9P09600_001 | Banana | nucleus | 35.13 | 40.22 |
| Solyc01g107140.1.1 | Tomato | nucleus | 40.82 | 39.09 |
| Solyc10g049720.1.1 | Tomato | nucleus | 36.39 | 38.59 |
| PGSC0003DMT400087143 | Potato | nucleus | 40.51 | 38.44 |
| PGSC0003DMT400089728 | Potato | nucleus | 36.71 | 38.03 |
| EER99632 | Sorghum | nucleus | 33.54 | 37.59 |
| KRH15444 | Soybean | nucleus | 41.14 | 37.14 |
| Zm00001d021988_P001 | Maize | nucleus | 33.86 | 36.27 |
| KRH05600 | Soybean | nucleus | 40.51 | 36.26 |
| KRH35669 | Soybean | nucleus | 40.82 | 36.03 |
| AT2G14760.3 | Thale cress | nucleus | 38.61 | 35.78 |
| Os07t0588400-00 | Rice | nucleus | 33.23 | 35.59 |
| KRH35668 | Soybean | nucleus | 39.56 | 35.51 |
| Zm00001d006733_P001 | Maize | nucleus | 31.96 | 35.31 |
| Bra011476.1-P | Field mustard | nucleus | 38.61 | 35.16 |
| KRG91108 | Soybean | nucleus | 39.24 | 35.13 |
| CDX75386 | Canola | nucleus | 38.29 | 34.87 |
| Bra034587.1-P | Field mustard | nucleus | 37.97 | 34.68 |
| KRG91107 | Soybean | nucleus | 39.24 | 34.64 |
| CDX69011 | Canola | nucleus | 37.97 | 34.58 |
| CDX72435 | Canola | nucleus | 37.66 | 34.0 |
| Bra036969.1-P | Field mustard | nucleus | 37.66 | 34.0 |
| CDY49379 | Canola | nucleus | 37.34 | 33.71 |
| CDY28328 | Canola | nucleus | 37.66 | 33.43 |
| AT4G33880.1 | Thale cress | nucleus | 37.03 | 33.24 |
| Bra039819.1-P | Field mustard | nucleus | 36.08 | 32.95 |
| CDX81461 | Canola | nucleus | 36.08 | 32.95 |
| CDY37221 | Canola | nucleus | 35.76 | 32.66 |
| GSMUA_Achr6P18580_001 | Banana | cytosol | 11.71 | 30.33 |
| GSMUA_Achr7P23410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 14.56 | 27.38 |
| CDY48431 | Canola | nucleus | 26.9 | 26.48 |
| GSMUA_Achr8P23350_001 | Banana | nucleus | 12.97 | 26.45 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 12.66 | 23.95 |
| GSMUA_Achr11P... | Banana | nucleus | 13.92 | 23.04 |
| GSMUA_Achr10P... | Banana | nucleus | 21.2 | 22.48 |
| GSMUA_Achr5P01290_001 | Banana | nucleus | 13.92 | 22.22 |
| GSMUA_Achr2P22860_001 | Banana | nucleus | 21.52 | 21.12 |
| GSMUA_Achr9P29130_001 | Banana | nucleus | 10.13 | 20.91 |
| GSMUA_Achr6P09370_001 | Banana | nucleus | 20.89 | 19.47 |
| GSMUA_Achr10P... | Banana | nucleus | 14.87 | 19.42 |
| GSMUA_Achr4P18820_001 | Banana | nucleus | 12.03 | 18.54 |
| GSMUA_Achr9P15380_001 | Banana | nucleus | 13.92 | 17.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.87 | 17.22 |
| GSMUA_Achr3P25950_001 | Banana | nucleus | 17.41 | 15.62 |
| GSMUA_Achr8P24970_001 | Banana | nucleus | 16.77 | 15.23 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P17130_001 | EnsemblPlants:GSMUA_Achr2T17130_001 | EnsemblPlantsGene:GSMUA_Achr2G17130_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF105 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294AB84 | UniProt:M0S8Q4 | MapMan:15.5.32 | : | : |
Description
Putative Transcription factor bHLH84 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17130_001]
Coordinates
chr2:+:17777780..17779089
Molecular Weight (calculated)
33734.2 Da
IEP (calculated)
4.610
GRAVY (calculated)
-0.532
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPGVAAQEA RWSSFGAEDS EIMAQLLGPF SCTNEQAVKD LSFGLSSMSW SSDHAADSYD SSEPNAAPAI NTSSASAFTA YCTVGDQLIT PSLRLIPNPS
101: FGDPTNANEE TSSDDAGDSS FILSEPVPGM TLPKRKLNTY EDDSPDDVSK KKAKAGANVS VNAKKAQSKR PQKTTKSSDD EDKMNNTAAN GRSSCSCLSE
201: DDSLADLNGG GTTTSGSPAL ILAGKARAGR GSATDPQSLY ARKRRERINE KLKILQNLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DELWMYAPIA
301: YNGMNIGLDL KISPPQ
101: FGDPTNANEE TSSDDAGDSS FILSEPVPGM TLPKRKLNTY EDDSPDDVSK KKAKAGANVS VNAKKAQSKR PQKTTKSSDD EDKMNNTAAN GRSSCSCLSE
201: DDSLADLNGG GTTTSGSPAL ILAGKARAGR GSATDPQSLY ARKRRERINE KLKILQNLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DELWMYAPIA
301: YNGMNIGLDL KISPPQ
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARKRRERIN ERLRILQHLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS
301: SDDLWMYAPI AYNGMDIGLD LKLNALTR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.