Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P18580_001 | Banana | cytosol | 41.18 | 51.64 |
| GSMUA_Achr8P23350_001 | Banana | nucleus | 45.75 | 45.16 |
| GSMUA_Achr7P23410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 41.83 | 38.1 |
| GSMUA_Achr5P01290_001 | Banana | nucleus | 43.14 | 33.33 |
| VIT_18s0001g10400.t01 | Wine grape | nucleus | 53.59 | 33.06 |
| GSMUA_Achr11P... | Banana | nucleus | 41.18 | 32.98 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 35.95 | 32.93 |
| VIT_07s0031g00550.t01 | Wine grape | nucleus | 53.59 | 32.54 |
| KRH61303 | Soybean | nucleus | 53.59 | 31.06 |
| GSMUA_Achr10P... | Banana | nucleus | 49.02 | 30.99 |
| Solyc04g078790.2.1 | Tomato | nucleus | 49.02 | 30.49 |
| PGSC0003DMT400020558 | Potato | nucleus | 49.67 | 30.04 |
| GSMUA_Achr3P01250_001 | Banana | cytosol, nucleus, plastid | 22.88 | 28.93 |
| GSMUA_Achr9P15380_001 | Banana | nucleus | 45.1 | 28.16 |
| GSMUA_Achr6P16890_001 | Banana | nucleus | 22.22 | 25.0 |
| GSMUA_Achr4P18820_001 | Banana | nucleus | 30.72 | 22.93 |
| GSMUA_Achr4P23240_001 | Banana | nucleus | 21.57 | 22.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.22 | 21.98 |
| GSMUA_Achr8P24970_001 | Banana | nucleus | 39.22 | 17.24 |
| GSMUA_Achr3P25950_001 | Banana | nucleus | 37.25 | 16.19 |
| GSMUA_Achr9P09600_001 | Banana | nucleus | 21.57 | 11.96 |
| GSMUA_Achr10P... | Banana | nucleus | 22.88 | 11.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.88 | 11.71 |
| GSMUA_Achr2P22860_001 | Banana | nucleus | 23.53 | 11.18 |
| GSMUA_Achr6P09370_001 | Banana | nucleus | 24.18 | 10.91 |
| GSMUA_Achr6P07760_001 | Banana | nucleus | 20.26 | 10.8 |
| GSMUA_Achr3P18870_001 | Banana | nucleus | 24.18 | 10.69 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 20.91 | 10.13 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P29130_001 | EnsemblPlants:GSMUA_Achr9T29130_001 | EnsemblPlantsGene:GSMUA_Achr9G29130_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF74 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294FD34 | UniProt:M0U4H0 | MapMan:15.5.32 | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G29130_001]
Coordinates
chr9:-:32889920..32890381
Molecular Weight (calculated)
17076.7 Da
IEP (calculated)
11.337
GRAVY (calculated)
-0.427
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEMIFLVAA MQPIHVNREL LNPPKRRNVR VSKDPQSVAA RHRRERISRR IRMLQQLVPG GPKMDTASML DEAIHYVKFL KRQVQFLERA ASSAVNGLST
101: TGAATTTTTT TTGFSAVGTG FMDGSYLWFE KGYDGGLGSS SRTTMSQMHV ERK
101: TGAATTTTTT TTGFSAVGTG FMDGSYLWFE KGYDGGLGSS SRTTMSQMHV ERK
001: MEKLPEFCNP NSSFFSPDHN NTYPFLFNST HYQSDHSMTN EPGFRYGSGL LTNPSSISPN TAYSSVFLDK RNNSNNNNNG TNMAAMREMI FRIAVMQPIH
101: IDPEAVKPPK RRNVRISKDP QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLEEQAVVTG GGGGGGGRVL IGGGGMTAAS
201: GGGGGGGVVM KGCGTVGTHQ MVGNAQILR
101: IDPEAVKPPK RRNVRISKDP QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLEEQAVVTG GGGGGGGRVL IGGGGMTAAS
201: GGGGGGGVVM KGCGTVGTHQ MVGNAQILR
Arabidopsis Description
HEC1HEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.