Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P14400_001 | Banana | nucleus | 36.26 | 59.28 |
| GSMUA_Achr6P18580_001 | Banana | cytosol | 22.71 | 50.82 |
| GSMUA_Achr9P29130_001 | Banana | nucleus | 21.98 | 39.22 |
| GSMUA_Achr7P23410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 23.08 | 37.5 |
| GSMUA_Achr8P23350_001 | Banana | nucleus | 20.51 | 36.13 |
| GSMUA_Achr11P... | Banana | nucleus | 22.71 | 32.46 |
| GSMUA_Achr3P01250_001 | Banana | cytosol, nucleus, plastid | 14.29 | 32.23 |
| GSMUA_Achr5P01290_001 | Banana | nucleus | 23.08 | 31.82 |
| GSMUA_Achr3P25950_001 | Banana | nucleus | 41.03 | 31.82 |
| Bra001826.1-P | Field mustard | nucleus | 37.36 | 31.48 |
| Bra031275.1-P | Field mustard | nucleus | 38.1 | 31.33 |
| CDY51449 | Canola | nucleus | 38.1 | 31.33 |
| CDY62045 | Canola | nucleus | 38.1 | 31.04 |
| CDY32423 | Canola | nucleus | 37.36 | 30.91 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 43.22 | 30.57 |
| Os01t0707500-01 | Rice | nucleus | 43.59 | 30.28 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 42.12 | 30.26 |
| GSMUA_Achr8P24970_001 | Banana | nucleus | 38.1 | 29.89 |
| TraesCS3A01G252200.1 | Wheat | nucleus | 42.12 | 29.79 |
| CDY48884 | Canola | nucleus | 36.26 | 29.55 |
| KXG33221 | Sorghum | nucleus | 44.69 | 29.19 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 43.22 | 29.14 |
| Os05t0541400-00 | Rice | nucleus | 43.96 | 28.85 |
| GSMUA_Achr9P15380_001 | Banana | nucleus | 25.27 | 28.16 |
| PGSC0003DMT400006453 | Potato | nucleus | 39.56 | 27.98 |
| Zm00001d038863_P001 | Maize | nucleus | 40.29 | 27.78 |
| Zm00001d043699_P001 | Maize | nucleus | 42.86 | 27.73 |
| Solyc03g121240.1.1 | Tomato | nucleus | 38.46 | 27.63 |
| AT3G21330.1 | Thale cress | nucleus | 37.36 | 27.35 |
| GSMUA_Achr6P16890_001 | Banana | nucleus | 13.55 | 27.21 |
| TraesCS1D01G367700.1 | Wheat | nucleus | 39.56 | 26.93 |
| EES18589 | Sorghum | nucleus | 39.56 | 26.93 |
| TraesCS1A01G362800.1 | Wheat | nucleus | 38.83 | 26.84 |
| GSMUA_Achr4P23240_001 | Banana | nucleus | 14.29 | 26.71 |
| GSMUA_Achr10P... | Banana | nucleus | 23.44 | 26.45 |
| TraesCS1B01G380000.1 | Wheat | nucleus | 38.46 | 26.38 |
| HORVU1Hr1G079450.1 | Barley | nucleus | 38.46 | 26.25 |
| KRH23349 | Soybean | nucleus | 42.12 | 25.56 |
| KRH09982 | Soybean | nucleus | 40.66 | 24.94 |
| KRH47179 | Soybean | nucleus | 38.83 | 24.59 |
| KRH44227 | Soybean | nucleus | 38.83 | 23.93 |
| Zm00001d011187_P001 | Maize | nucleus | 37.0 | 23.49 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 39.19 | 22.72 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 38.46 | 22.48 |
| GSMUA_Achr4P18820_001 | Banana | nucleus | 16.85 | 22.44 |
| Os01t0566800-00 | Rice | nucleus | 38.1 | 22.32 |
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 38.1 | 22.17 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 38.46 | 22.15 |
| HORVU3Hr1G048770.1 | Barley | plastid | 37.73 | 21.37 |
| Zm00001d044242_P001 | Maize | nucleus | 36.63 | 20.79 |
| OQU87026 | Sorghum | nucleus | 33.7 | 19.96 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 17.22 | 14.87 |
| GSMUA_Achr9P09600_001 | Banana | nucleus | 15.02 | 14.86 |
| GSMUA_Achr6P07760_001 | Banana | nucleus | 15.38 | 14.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.75 | 14.38 |
| GSMUA_Achr10P... | Banana | nucleus | 15.02 | 13.76 |
| GSMUA_Achr2P22860_001 | Banana | nucleus | 15.38 | 13.04 |
| GSMUA_Achr3P18870_001 | Banana | nucleus | 16.48 | 13.01 |
| GSMUA_Achr6P09370_001 | Banana | nucleus | 15.75 | 12.68 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP11120_001 | EnsemblPlants:GSMUA_AchrUn_randomT11120_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG11120_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF303 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000294928A | UniProt:M0U871 | MapMan:15.5.32 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11120_001]
Coordinates
chrchrUn_random:+:54032223..54033044
Molecular Weight (calculated)
31154.5 Da
IEP (calculated)
7.251
GRAVY (calculated)
-0.793
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDPFCCPSE NFGSFDQLQV NIDNNDEDHF DNFSSTKSTC RLSCSATISS AEFETHGLFD YHIPNLDRQN SFIPDVPGVE SSREKYIAKR KLEDYEKEGE
101: NCCKKGGFEI SFRNAPRQKK LRSEKNSGPS SINFSQQSYY ELDTEAIAQV KEMIYRAAAL RPVHLGLEEA SEKPKRKNVR ISSDPQTVAA RHRRERISER
201: LRMLQKLVPG GSKMDTATML DEAANYLKFL KSQVRALETL GNEHDPMDRY TVPFGSTFHS GFSHAKPFLH REP
101: NCCKKGGFEI SFRNAPRQKK LRSEKNSGPS SINFSQQSYY ELDTEAIAQV KEMIYRAAAL RPVHLGLEEA SEKPKRKNVR ISSDPQTVAA RHRRERISER
201: LRMLQKLVPG GSKMDTATML DEAANYLKFL KSQVRALETL GNEHDPMDRY TVPFGSTFHS GFSHAKPFLH REP
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.