Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48884 | Canola | nucleus | 92.73 | 91.34 |
| CDY51449 | Canola | nucleus | 81.82 | 81.33 |
| CDY62045 | Canola | nucleus | 81.82 | 80.6 |
| AT3G21330.1 | Thale cress | nucleus | 87.88 | 77.75 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 24.24 | 47.9 |
| KRH47179 | Soybean | nucleus | 50.61 | 38.75 |
| Solyc03g121240.1.1 | Tomato | nucleus | 44.24 | 38.42 |
| PGSC0003DMT400006453 | Potato | nucleus | 44.55 | 38.08 |
| KRH44227 | Soybean | nucleus | 50.3 | 37.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.91 | 37.36 |
| KRH09982 | Soybean | nucleus | 49.7 | 36.85 |
| KRH23349 | Soybean | nucleus | 50.0 | 36.67 |
| CDX91916 | Canola | cytosol | 19.7 | 36.52 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 51.52 | 36.09 |
| CDX74329 | Canola | cytosol | 18.79 | 34.07 |
| CDY30593 | Canola | nucleus | 21.82 | 33.8 |
| CDX68583 | Canola | nucleus | 22.42 | 32.6 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 20.3 | 32.37 |
| CDY18636 | Canola | nucleus | 20.0 | 32.2 |
| CDX83121 | Canola | nucleus | 22.12 | 31.74 |
| GSMUA_Achr8P24970_001 | Banana | nucleus | 33.33 | 31.61 |
| CDY17765 | Canola | nucleus | 21.21 | 30.97 |
| CDY12799 | Canola | nucleus | 20.3 | 30.73 |
| CDX85799 | Canola | nucleus | 19.7 | 30.37 |
| CDY64847 | Canola | nucleus | 19.7 | 30.23 |
| CDY01443 | Canola | nucleus | 20.0 | 30.14 |
| GSMUA_Achr3P25950_001 | Banana | nucleus | 31.52 | 29.55 |
| CDY43559 | Canola | nucleus | 20.61 | 29.44 |
| CDY21597 | Canola | nucleus | 19.7 | 29.15 |
| CDY63952 | Canola | nucleus | 20.3 | 29.0 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 31.21 | 27.11 |
| KXG33221 | Sorghum | nucleus | 34.24 | 27.03 |
| Os01t0707500-01 | Rice | nucleus | 32.12 | 26.97 |
| TraesCS3A01G252200.1 | Wheat | nucleus | 31.21 | 26.68 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 30.91 | 26.42 |
| Zm00001d043699_P001 | Maize | nucleus | 33.33 | 26.07 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 31.52 | 25.68 |
| EES18589 | Sorghum | nucleus | 30.91 | 25.44 |
| Zm00001d038863_P001 | Maize | nucleus | 30.0 | 25.0 |
| Os05t0541400-00 | Rice | nucleus | 31.21 | 24.76 |
| TraesCS1A01G362800.1 | Wheat | nucleus | 29.09 | 24.3 |
| CDY55900 | Canola | nucleus, plastid | 13.03 | 24.29 |
| CDY66929 | Canola | nucleus, plastid | 13.03 | 24.29 |
| TraesCS1D01G367700.1 | Wheat | nucleus | 29.39 | 24.19 |
| TraesCS1B01G380000.1 | Wheat | nucleus | 29.09 | 24.12 |
| HORVU1Hr1G079450.1 | Barley | nucleus | 28.79 | 23.75 |
| Zm00001d011187_P001 | Maize | nucleus | 30.91 | 23.72 |
| Os01t0566800-00 | Rice | nucleus | 31.21 | 22.1 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 30.91 | 21.84 |
| Zm00001d044242_P001 | Maize | nucleus | 31.21 | 21.41 |
| HORVU3Hr1G048770.1 | Barley | plastid | 31.21 | 21.37 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 30.61 | 21.31 |
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 29.7 | 20.9 |
| CDY15706 | Canola | nucleus | 12.42 | 19.34 |
| OQU87026 | Sorghum | nucleus | 26.36 | 18.87 |
| CDY03948 | Canola | cytosol | 7.88 | 17.93 |
| CDX90106 | Canola | nucleus | 11.21 | 17.37 |
| CDY27630 | Canola | nucleus | 12.12 | 16.53 |
| CDX84906 | Canola | nucleus | 12.12 | 16.39 |
| CDX68049 | Canola | nucleus | 13.94 | 15.86 |
| CDY11694 | Canola | nucleus | 13.94 | 15.86 |
| CDX96145 | Canola | nucleus | 13.94 | 15.86 |
| CDY11768 | Canola | nucleus | 12.12 | 15.62 |
| CDY55674 | Canola | nucleus | 13.64 | 15.52 |
| CDX75386 | Canola | nucleus | 16.06 | 15.27 |
| CDX69011 | Canola | nucleus | 16.06 | 15.27 |
| CDY28328 | Canola | nucleus | 16.36 | 15.17 |
| CDY61813 | Canola | nucleus | 13.94 | 15.08 |
| CDY49379 | Canola | nucleus | 15.76 | 14.86 |
| CDX72435 | Canola | nucleus | 15.76 | 14.86 |
| CDY11802 | Canola | nucleus | 10.3 | 14.78 |
| CDY58387 | Canola | nucleus | 13.64 | 14.66 |
| CDY48431 | Canola | nucleus | 13.64 | 14.02 |
| CDY37221 | Canola | nucleus | 14.55 | 13.87 |
| CDX81461 | Canola | nucleus | 14.55 | 13.87 |
| CDY03946 | Canola | nucleus | 4.24 | 5.09 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078H6I5 | UniProt:A0A078H6I5 | EnsemblPlants:CDY32423 | ProteinID:CDY32423 |
| ProteinID:CDY32423.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00052027001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF293 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE42A3 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g42070DBnaC03g42070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6I5]
Coordinates
chrLK032294:+:308390..309382
Molecular Weight (calculated)
36718.9 Da
IEP (calculated)
6.292
GRAVY (calculated)
-0.670
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLESVYAQ AIYGMTRESK IMEHQGSDLI WGGNDLSRCF MSDIGIIGET QHHQHVGNRA SSIDPSSIDC LLSATTNSNN TSTEDDEGIS VLFSDCHTLW
101: SFGGVSSAES ENREITTETT TTKPKSSKRS RDETGSYFCL VGHPQEESEK GNFKLIYDEN QSKSKKPRTE KDRVGSSNIS FQQHSASLSD NVEPDAEAIA
201: QMKEMIYTAA AFRPVNLGLE VVEKPKRKNV KISTDPQTVA ARQRRERVSE KIRVLQTLVP GGTKMDTASM LDEAANYLKF LRAQVKALEN LRPKLDPANF
301: SFSSPSSYPL VHPSFLPFQN PNQVHHHQEC
101: SFGGVSSAES ENREITTETT TTKPKSSKRS RDETGSYFCL VGHPQEESEK GNFKLIYDEN QSKSKKPRTE KDRVGSSNIS FQQHSASLSD NVEPDAEAIA
201: QMKEMIYTAA AFRPVNLGLE VVEKPKRKNV KISTDPQTVA ARQRRERVSE KIRVLQTLVP GGTKMDTASM LDEAANYLKF LRAQVKALEN LRPKLDPANF
301: SFSSPSSYPL VHPSFLPFQN PNQVHHHQEC
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.