Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037128.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 98.54 | 98.54 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 96.59 | 95.65 |
| CDY43559 | Canola | nucleus | 88.29 | 78.36 |
| CDY63952 | Canola | nucleus | 87.8 | 77.92 |
| CDY01443 | Canola | nucleus | 82.93 | 77.63 |
| CDY12799 | Canola | nucleus | 82.44 | 77.52 |
| AT5G67060.1 | Thale cress | nucleus | 84.88 | 72.2 |
| Solyc12g088790.1.1 | Tomato | nucleus | 40.49 | 68.59 |
| CDX68583 | Canola | nucleus | 73.17 | 66.08 |
| CDX83121 | Canola | nucleus | 73.17 | 65.22 |
| CDY17765 | Canola | nucleus | 71.71 | 65.04 |
| CDY30593 | Canola | nucleus | 66.34 | 63.85 |
| PGSC0003DMT400048857 | Potato | nucleus | 39.51 | 54.73 |
| KRH28464 | Soybean | nucleus | 53.66 | 45.45 |
| PGSC0003DMT400010344 | Potato | nucleus | 49.27 | 45.09 |
| KRH77007 | Soybean | nucleus | 53.17 | 43.43 |
| TraesCS7D01G263400.1 | Wheat | nucleus | 46.34 | 43.18 |
| HORVU7Hr1G054880.1 | Barley | nucleus | 46.34 | 42.79 |
| TraesCS7A01G262600.1 | Wheat | nucleus | 45.85 | 42.73 |
| TraesCS7B01G160500.1 | Wheat | nucleus | 45.37 | 42.08 |
| KRH57944 | Soybean | nucleus | 49.76 | 40.16 |
| Os09t0455300-01 | Rice | nucleus | 45.37 | 39.41 |
| TraesCS5A01G237500.1 | Wheat | nucleus | 44.88 | 39.15 |
| TraesCS5D01G244000.1 | Wheat | nucleus | 44.88 | 39.15 |
| HORVU5Hr1G068110.1 | Barley | nucleus | 45.37 | 39.08 |
| TraesCS5B01G235200.1 | Wheat | nucleus | 44.39 | 38.72 |
| TraesCS6A01G142000.1 | Wheat | nucleus | 44.39 | 38.72 |
| KRH04603 | Soybean | nucleus | 52.68 | 38.3 |
| Zm00001d050016_P001 | Maize | nucleus | 44.88 | 38.17 |
| CDX91916 | Canola | cytosol | 32.68 | 37.64 |
| Zm00001d020705_P001 | Maize | nucleus | 44.39 | 37.6 |
| GSMUA_Achr9P15380_001 | Banana | nucleus | 44.39 | 37.14 |
| CDX85799 | Canola | nucleus | 37.56 | 35.98 |
| CDY64847 | Canola | nucleus | 37.56 | 35.81 |
| CDX74329 | Canola | cytosol | 31.71 | 35.71 |
| EER96848 | Sorghum | nucleus | 45.37 | 35.63 |
| Zm00001d005841_P001 | Maize | nucleus | 41.95 | 35.54 |
| Zm00001d031781_P001 | Maize | nucleus | 43.41 | 35.46 |
| EES15124 | Sorghum | nucleus | 46.34 | 35.32 |
| CDY21597 | Canola | nucleus | 36.59 | 33.63 |
| CDY55900 | Canola | nucleus, plastid | 22.93 | 26.55 |
| CDY66929 | Canola | nucleus, plastid | 22.93 | 26.55 |
| CDY51449 | Canola | nucleus | 33.66 | 20.78 |
| CDY62045 | Canola | nucleus | 33.17 | 20.3 |
| CDY32423 | Canola | nucleus | 32.2 | 20.0 |
| CDX90106 | Canola | nucleus | 20.49 | 19.72 |
| CDY15706 | Canola | nucleus | 20.0 | 19.34 |
| CDY48884 | Canola | nucleus | 31.22 | 19.1 |
| CDY03948 | Canola | cytosol | 13.17 | 18.62 |
| CDY27630 | Canola | nucleus | 21.95 | 18.59 |
| CDX84906 | Canola | nucleus | 21.95 | 18.44 |
| CDY11768 | Canola | nucleus | 20.98 | 16.8 |
| CDY11802 | Canola | nucleus | 18.54 | 16.52 |
| CDY55674 | Canola | nucleus | 21.95 | 15.52 |
| CDX68049 | Canola | nucleus | 21.46 | 15.17 |
| CDX96145 | Canola | nucleus | 21.46 | 15.17 |
| CDY11694 | Canola | nucleus | 21.46 | 15.17 |
| CDY61813 | Canola | nucleus | 21.95 | 14.75 |
| CDY58387 | Canola | nucleus | 21.95 | 14.66 |
| CDY28328 | Canola | nucleus | 23.9 | 13.76 |
| CDX72435 | Canola | nucleus | 21.95 | 12.86 |
| CDY49379 | Canola | nucleus | 21.95 | 12.86 |
| CDX75386 | Canola | nucleus | 21.46 | 12.68 |
| CDX69011 | Canola | nucleus | 21.46 | 12.68 |
| CDY48431 | Canola | nucleus | 18.54 | 11.84 |
| CDX81461 | Canola | nucleus | 19.51 | 11.56 |
| CDY37221 | Canola | nucleus | 19.51 | 11.56 |
| CDY03946 | Canola | nucleus | 6.83 | 5.09 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078G040 | UniProt:A0A078G040 | EnsemblPlants:CDY18636 | ProteinID:CDY18636 |
| ProteinID:CDY18636.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00005698001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF74 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE59B7 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g07590DBnaA09g07590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G040]
Coordinates
chrLK032087:+:259197..259814
Molecular Weight (calculated)
23335.2 Da
IEP (calculated)
9.900
GRAVY (calculated)
-0.581
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDIMNMMM QHMENLPEFY NTNPSLIDHN NNTYPFLFNS NHNHSDSMTH EPGFRYGSGL HASPAYSSIL HDKRHNISNT DNMAAMREMI FRIAMMQPIH
101: IDPEAVKPPK RRNVRISKDP QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLEEQAVVNG GGVVMKGCGS MGTAHQMVGK
201: AHILR
101: IDPEAVKPPK RRNVRISKDP QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH YVKFLKKQVQ SLEEQAVVNG GGVVMKGCGS MGTAHQMVGK
201: AHILR
001: MDNSDILMNM MMQQMEKLPE HFSNSNPNPN PHNIMMLSES NTHPFFFNPT HSHLPFDQTM PHHQPGLNFR YAPSPSSSLP EKRGGCSDNA NMAAMREMIF
101: RIAVMQPIHI DPESVKPPKR KNVRISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIHY VKFLKKQVQS LEEHAVVNGG GMTAVAGGAL
201: AGTVGGGYGG KGCGIMRSDH HQMLGNAQIL R
101: RIAVMQPIHI DPESVKPPKR KNVRISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIHY VKFLKKQVQS LEEHAVVNGG GMTAVAGGAL
201: AGTVGGGYGG KGCGIMRSDH HQMLGNAQIL R
Arabidopsis Description
HEC2Transcription factor HEC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SND4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.