Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034587.1-P | Field mustard | nucleus | 94.1 | 96.82 |
| CDY48431 | Canola | nucleus | 81.74 | 90.65 |
| CDX69011 | Canola | nucleus | 81.74 | 83.86 |
| CDY49379 | Canola | nucleus | 82.3 | 83.71 |
| CDX72435 | Canola | nucleus | 81.46 | 82.86 |
| CDX75386 | Canola | nucleus | 79.49 | 81.56 |
| CDX81461 | Canola | nucleus | 57.02 | 58.67 |
| CDY37221 | Canola | nucleus | 55.9 | 57.51 |
| PGSC0003DMT400008370 | Potato | nucleus | 27.81 | 50.0 |
| CDX90106 | Canola | nucleus | 26.12 | 43.66 |
| Solyc10g049780.1.1 | Tomato | nucleus | 33.15 | 43.38 |
| VIT_03s0091g00730.t01 | Wine grape | nucleus | 41.29 | 42.0 |
| CDY15706 | Canola | nucleus | 25.0 | 41.98 |
| PGSC0003DMT400089728 | Potato | nucleus | 35.67 | 41.64 |
| Solyc10g049720.1.1 | Tomato | nucleus | 34.83 | 41.61 |
| PGSC0003DMT400087143 | Potato | nucleus | 37.92 | 40.54 |
| Solyc01g107140.1.1 | Tomato | nucleus | 36.8 | 39.7 |
| CDX84906 | Canola | nucleus | 26.97 | 39.34 |
| CDY27630 | Canola | nucleus | 26.69 | 39.26 |
| CDY03948 | Canola | cytosol | 15.73 | 38.62 |
| CDY11768 | Canola | nucleus | 27.25 | 37.89 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 33.43 | 37.66 |
| KRG91108 | Soybean | nucleus | 37.08 | 37.39 |
| KRH35668 | Soybean | nucleus | 36.52 | 36.93 |
| KRH15444 | Soybean | nucleus | 35.39 | 36.0 |
| KRH35669 | Soybean | nucleus | 35.96 | 35.75 |
| CDY11802 | Canola | nucleus | 23.03 | 35.65 |
| KRH05600 | Soybean | nucleus | 34.27 | 34.56 |
| KRG91107 | Soybean | nucleus | 34.27 | 34.08 |
| CDY18636 | Canola | nucleus | 13.76 | 23.9 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 13.76 | 23.67 |
| CDY01443 | Canola | nucleus | 14.04 | 22.83 |
| CDY12799 | Canola | nucleus | 13.76 | 22.48 |
| CDY66929 | Canola | nucleus, plastid | 10.96 | 22.03 |
| CDY55900 | Canola | nucleus, plastid | 10.96 | 22.03 |
| CDX91916 | Canola | cytosol | 10.96 | 21.91 |
| CDX68049 | Canola | nucleus | 17.7 | 21.72 |
| CDY55674 | Canola | nucleus | 17.7 | 21.72 |
| CDX96145 | Canola | nucleus | 17.7 | 21.72 |
| CDY11694 | Canola | nucleus | 17.7 | 21.72 |
| CDY63952 | Canola | nucleus | 14.04 | 21.64 |
| CDY43559 | Canola | nucleus | 14.04 | 21.64 |
| CDY21597 | Canola | nucleus | 13.48 | 21.52 |
| CDX85799 | Canola | nucleus | 12.92 | 21.5 |
| CDY64847 | Canola | nucleus | 12.92 | 21.4 |
| CDX68583 | Canola | nucleus | 13.48 | 21.15 |
| CDY30593 | Canola | nucleus | 12.64 | 21.13 |
| CDX83121 | Canola | nucleus | 13.2 | 20.43 |
| CDX74329 | Canola | cytosol | 10.39 | 20.33 |
| CDY61813 | Canola | nucleus | 17.13 | 20.0 |
| CDY58387 | Canola | nucleus | 17.13 | 19.87 |
| CDY17765 | Canola | nucleus | 12.36 | 19.47 |
| CDY32423 | Canola | nucleus | 15.17 | 16.36 |
| CDY51449 | Canola | nucleus | 15.17 | 16.27 |
| CDY62045 | Canola | nucleus | 14.89 | 15.82 |
| CDY48884 | Canola | nucleus | 14.61 | 15.52 |
| CDY03946 | Canola | nucleus | 9.83 | 12.73 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078GUK7 | UniProt:A0A078GUK7 | EnsemblPlants:CDY28328 | ProteinID:CDY28328 |
| ProteinID:CDY28328.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00040094001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF105 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE88A5 | InterPro:bHLH_dom | SEG:seg |
Description
BnaC03g66310DBnaC03g66310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUK7]
Coordinates
chrLK032217:-:431801..435298
Molecular Weight (calculated)
39384.6 Da
IEP (calculated)
4.849
GRAVY (calculated)
-0.768
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAMGEWSNN LGGMYTYATE EADFMNQLLT SYDHPGTGSS SGTASADHHG LCWSLGSHHN HLTMMPEASS FCFSGESSSY SEYYAVAPPA VRENNNGSMD
101: FDMVDVTINT NSYLVGEETS EYDVEKYSSG KTRLPLGAVL ETHDDEESIL QPEISVTTTD HQKYLTGSKK RSRATSVDKN KKSKVGKRGQ KSFDMSGDDR
201: NGGEEEEGEK VKKRKTGPMM SRQNSSITLC SEDESHCASQ DVGGEEEEDA SKALNLNGKT RASRGAATDP QSLYARKRRE RINERLRILQ NLVPNGTKVD
301: ISTMLEEAVH YVKFLQLQIK LLSSDDMWMY APIAFNGMDI GLNSSRCGTS VYNEDL
101: FDMVDVTINT NSYLVGEETS EYDVEKYSSG KTRLPLGAVL ETHDDEESIL QPEISVTTTD HQKYLTGSKK RSRATSVDKN KKSKVGKRGQ KSFDMSGDDR
201: NGGEEEEGEK VKKRKTGPMM SRQNSSITLC SEDESHCASQ DVGGEEEEDA SKALNLNGKT RASRGAATDP QSLYARKRRE RINERLRILQ NLVPNGTKVD
301: ISTMLEEAVH YVKFLQLQIK LLSSDDMWMY APIAFNGMDI GLNSSRCGTS VYNEDL
001: MEAMGEWSNN LGGMYTYATE EADFMNQLLA SYDHPGTGSS SGAAASGDHQ GLYWNLGSHH NHLSLVSEAG SFCFSQESSS YSAGNSGYYT VVPPTVEENQ
101: NETMDFGMED VTINTNSYLV GEETSECDVE KYSSGKTLMP LETVVENHDD EESLLQSEIS VTTTKSLTGS KKRSRATSTD KNKRARVNKR AQKNVEMSGD
201: NNEGEEEEGE TKLKKRKNGA MMSRQNSSTT FCTEEESNCA DQDGGGEDSS SKEDDPSKAL NLNGKTRASR GAATDPQSLY ARKRRERINE RLRILQNLVP
301: NGTKVDISTM LEEAVHYVKF LQLQIKLLSS DDLWMYAPIA FNGMDIGLSS PR
101: NETMDFGMED VTINTNSYLV GEETSECDVE KYSSGKTLMP LETVVENHDD EESLLQSEIS VTTTKSLTGS KKRSRATSTD KNKRARVNKR AQKNVEMSGD
201: NNEGEEEEGE TKLKKRKNGA MMSRQNSSTT FCTEEESNCA DQDGGGEDSS SKEDDPSKAL NLNGKTRASR GAATDPQSLY ARKRRERINE RLRILQNLVP
301: NGTKVDISTM LEEAVHYVKF LQLQIKLLSS DDLWMYAPIA FNGMDIGLSS PR
Arabidopsis Description
BHLH85Transcription factor bHLH85 [Source:UniProtKB/Swiss-Prot;Acc:Q84WK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.