Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28328 | Canola | nucleus | 90.65 | 81.74 |
| CDX69011 | Canola | nucleus | 78.19 | 72.33 |
| CDY49379 | Canola | nucleus | 77.57 | 71.14 |
| CDX72435 | Canola | nucleus | 77.26 | 70.86 |
| CDX75386 | Canola | nucleus | 76.01 | 70.32 |
| CDX81461 | Canola | nucleus | 52.34 | 48.55 |
| CDY37221 | Canola | nucleus | 51.09 | 47.4 |
| VIT_03s0091g00730.t01 | Wine grape | nucleus | 34.58 | 31.71 |
| PGSC0003DMT400008370 | Potato | nucleus | 18.69 | 30.3 |
| PGSC0003DMT400089728 | Potato | nucleus | 28.35 | 29.84 |
| PGSC0003DMT400087143 | Potato | nucleus | 30.53 | 29.43 |
| Solyc10g049720.1.1 | Tomato | nucleus | 27.1 | 29.19 |
| Solyc10g049780.1.1 | Tomato | nucleus | 24.61 | 29.04 |
| Solyc01g107140.1.1 | Tomato | nucleus | 29.28 | 28.48 |
| CDX90106 | Canola | nucleus | 18.69 | 28.17 |
| EER99632 | Sorghum | nucleus | 24.3 | 27.66 |
| GSMUA_Achr2P17130_001 | Banana | nucleus | 26.48 | 26.9 |
| CDY15706 | Canola | nucleus | 17.76 | 26.89 |
| KRG91108 | Soybean | nucleus | 29.28 | 26.63 |
| KRH35668 | Soybean | nucleus | 28.97 | 26.42 |
| Zm00001d006733_P001 | Maize | nucleus | 23.36 | 26.22 |
| Os07t0588400-00 | Rice | nucleus | 23.99 | 26.1 |
| Zm00001d021988_P001 | Maize | nucleus | 23.99 | 26.1 |
| KRH15444 | Soybean | nucleus | 28.04 | 25.71 |
| CDX84906 | Canola | nucleus | 19.31 | 25.41 |
| CDY27630 | Canola | nucleus | 19.0 | 25.21 |
| KRH35669 | Soybean | nucleus | 28.04 | 25.14 |
| CDY11768 | Canola | nucleus | 19.94 | 25.0 |
| KRH05600 | Soybean | nucleus | 27.1 | 24.65 |
| KRG91107 | Soybean | nucleus | 27.41 | 24.58 |
| CDY11802 | Canola | nucleus | 17.45 | 24.35 |
| CDY18636 | Canola | nucleus | 11.84 | 18.54 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 11.84 | 18.36 |
| CDY01443 | Canola | nucleus | 12.15 | 17.81 |
| CDY12799 | Canola | nucleus | 11.84 | 17.43 |
| CDY03948 | Canola | cytosol | 7.48 | 16.55 |
| CDY43559 | Canola | nucleus | 11.84 | 16.45 |
| CDY63952 | Canola | nucleus | 11.84 | 16.45 |
| CDY30593 | Canola | nucleus | 10.9 | 16.43 |
| CDX74329 | Canola | cytosol | 9.03 | 15.93 |
| CDX85799 | Canola | nucleus | 10.59 | 15.89 |
| CDX68583 | Canola | nucleus | 11.21 | 15.86 |
| CDY64847 | Canola | nucleus | 10.59 | 15.81 |
| CDX91916 | Canola | cytosol | 8.72 | 15.73 |
| CDY21597 | Canola | nucleus | 10.9 | 15.7 |
| CDX83121 | Canola | nucleus | 10.9 | 15.22 |
| CDY17765 | Canola | nucleus | 10.59 | 15.04 |
| CDY55674 | Canola | nucleus | 13.4 | 14.83 |
| CDX68049 | Canola | nucleus | 13.4 | 14.83 |
| CDX96145 | Canola | nucleus | 13.4 | 14.83 |
| CDY11694 | Canola | nucleus | 13.4 | 14.83 |
| CDY55900 | Canola | nucleus, plastid | 8.1 | 14.69 |
| CDY66929 | Canola | nucleus, plastid | 8.1 | 14.69 |
| CDY51449 | Canola | nucleus | 14.33 | 13.86 |
| CDY61813 | Canola | nucleus | 13.08 | 13.77 |
| CDY58387 | Canola | nucleus | 13.08 | 13.68 |
| CDY32423 | Canola | nucleus | 14.02 | 13.64 |
| CDY62045 | Canola | nucleus | 14.02 | 13.43 |
| CDY48884 | Canola | nucleus | 13.4 | 12.84 |
| CDY03946 | Canola | nucleus | 10.9 | 12.73 |
Protein Annotations
| EnsemblPlants:CDY48431 | EnsemblPlantsGene:GSBRNA2T00089465001 | GO:A0A078IEG7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR16223 |
| PANTHER:PTHR16223:SF105 | PFscan:PS50888 | ProteinID:CDY48431 | ProteinID:CDY48431.1 | SEG:seg | SUPFAM:SSF47459 |
| UniParc:UPI0004EF0B4B | UniProt:A0A078IEG7 | MapMan:15.5.32 | : | : | : |
Description
BnaA08g11400DBnaA08g11400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEG7]
Coordinates
chrLK032773:+:2285..3521
Molecular Weight (calculated)
35410.8 Da
IEP (calculated)
5.295
GRAVY (calculated)
-0.874
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAMGEWSNN LGGMYTYATE EADFMNQLLT SYDHPGTGSS SGTASADHQG LCWSLGSHHN HLTIMPEASS FCFSGESSSY SEYYAVAPPE VRENNNGSMD
101: FDMVDVTINT NSYLVGEETS ECDVEKYSSG KTRLPLGAVL ETHDDVESML QPEISVTTTD HQKYLTGSKK RSRATSADKN KKAKVGKRGQ KSLEMSGDDR
201: NGGEEEEGEK VKKRKTGPMM SRQNSSITLC SEDESHCASQ DVGGEDEEDA SKALNLNGKT RASRGAATDP QSLYARKRRE RINERLRILQ NLVPNGTKVK
301: TCYDSSHTRN DSKILSIYLI Y
101: FDMVDVTINT NSYLVGEETS ECDVEKYSSG KTRLPLGAVL ETHDDVESML QPEISVTTTD HQKYLTGSKK RSRATSADKN KKAKVGKRGQ KSLEMSGDDR
201: NGGEEEEGEK VKKRKTGPMM SRQNSSITLC SEDESHCASQ DVGGEDEEDA SKALNLNGKT RASRGAATDP QSLYARKRRE RINERLRILQ NLVPNGTKVK
301: TCYDSSHTRN DSKILSIYLI Y
001: MEAMGEWSTG LGGIYTEEAD FMNQLLASYE QPCGGSSSET TATLTAYHHQ GSQWNGGFCF SQESSSYSGY CAAMPRQEED NNGMEDATIN TNLYLVGEET
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARVIYT
101: SECDATEYSG KSLLPLETVA ENHDHSMLQP ENSLTTTTDE KMFNQCESSK KRTRATTTDK NKRANKARRS QKCVEMSGEN ENSGEEEYTE KAAGKRKTKP
201: LKPQKTCCSD DESNGGDTFL SKEDGEDSKA LNLNGKTRAS RGAATDPQSL YARVIYT
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IGG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.