Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55900 | Canola | nucleus, plastid | 96.61 | 96.61 |
| AT5G01305.1 | Thale cress | nucleus, plastid | 67.23 | 69.59 |
| VIT_08s0058g00110.t01 | Wine grape | plastid | 40.11 | 44.1 |
| Solyc09g005070.1.1 | Tomato | nucleus | 31.64 | 37.84 |
| KRH65648 | Soybean | nucleus, plastid | 38.42 | 37.36 |
| KRH75991 | Soybean | nucleus, plastid | 36.16 | 35.96 |
| KRH00301 | Soybean | nucleus, plastid | 35.59 | 35.8 |
| KRH49427 | Soybean | nucleus, plastid | 35.03 | 35.23 |
| GSMUA_Achr4P18820_001 | Banana | nucleus | 36.16 | 31.22 |
| TraesCS3B01G383000.1 | Wheat | nucleus | 32.2 | 26.89 |
| TraesCS3A01G350600.1 | Wheat | nucleus | 32.2 | 26.89 |
| TraesCS3D01G344600.1 | Wheat | nucleus | 32.2 | 26.76 |
| HORVU3Hr1G087710.1 | Barley | nucleus | 31.64 | 26.67 |
| Zm00001d042989_P001 | Maize | nucleus, plastid | 31.07 | 26.07 |
| Zm00001d042988_P001 | Maize | nucleus, plastid | 31.07 | 26.07 |
| Os01t0831000-01 | Rice | nucleus | 31.07 | 25.58 |
| CDX91916 | Canola | cytosol | 24.86 | 24.72 |
| CDX74329 | Canola | cytosol | 23.73 | 23.08 |
| CDY18636 | Canola | nucleus | 26.55 | 22.93 |
| CDX85799 | Canola | nucleus | 27.68 | 22.9 |
| CDY64847 | Canola | nucleus | 27.68 | 22.79 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 26.55 | 22.71 |
| CDY30593 | Canola | nucleus | 25.99 | 21.6 |
| CDY12799 | Canola | nucleus | 26.55 | 21.56 |
| CDY21597 | Canola | nucleus | 27.12 | 21.52 |
| CDY01443 | Canola | nucleus | 25.99 | 21.0 |
| CDY17765 | Canola | nucleus | 26.55 | 20.8 |
| CDX83121 | Canola | nucleus | 25.99 | 20.0 |
| CDY63952 | Canola | nucleus | 25.99 | 19.91 |
| CDY43559 | Canola | nucleus | 25.99 | 19.91 |
| CDX68583 | Canola | nucleus | 25.42 | 19.82 |
| OQU87789 | Sorghum | cytosol | 14.12 | 17.48 |
| CDY03948 | Canola | cytosol | 14.12 | 17.24 |
| CDX90106 | Canola | nucleus | 19.77 | 16.43 |
| CDY15706 | Canola | nucleus | 19.21 | 16.04 |
| CDY11802 | Canola | nucleus | 19.21 | 14.78 |
| CDY27630 | Canola | nucleus | 19.77 | 14.46 |
| CDX84906 | Canola | nucleus | 19.77 | 14.34 |
| CDX68049 | Canola | nucleus | 22.6 | 13.79 |
| CDY55674 | Canola | nucleus | 22.6 | 13.79 |
| CDX96145 | Canola | nucleus | 22.6 | 13.79 |
| CDY11694 | Canola | nucleus | 22.6 | 13.79 |
| CDY11768 | Canola | nucleus | 19.77 | 13.67 |
| CDY61813 | Canola | nucleus | 23.16 | 13.44 |
| CDY58387 | Canola | nucleus | 23.16 | 13.36 |
| CDY32423 | Canola | nucleus | 24.29 | 13.03 |
| CDY51449 | Canola | nucleus | 24.29 | 12.95 |
| CDY62045 | Canola | nucleus | 23.73 | 12.54 |
| CDY48884 | Canola | nucleus | 23.16 | 12.24 |
| CDY28328 | Canola | nucleus | 22.03 | 10.96 |
| CDY37221 | Canola | nucleus | 20.9 | 10.69 |
| CDX81461 | Canola | nucleus | 20.9 | 10.69 |
| CDX75386 | Canola | nucleus | 20.9 | 10.66 |
| CDX69011 | Canola | nucleus | 20.9 | 10.66 |
| CDY49379 | Canola | nucleus | 20.9 | 10.57 |
| CDX72435 | Canola | nucleus | 20.9 | 10.57 |
| CDY48431 | Canola | nucleus | 14.69 | 8.1 |
| CDY03946 | Canola | nucleus | 5.65 | 3.64 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078JJL5 | UniProt:A0A078JJL5 | EnsemblPlants:CDY66929 | ProteinID:CDY66929 |
| ProteinID:CDY66929.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00057652001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF167 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEE988 | InterPro:bHLH_dom | SEG:seg |
Description
BnaCnng52850DBnaCnng52850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJL5]
Coordinates
chrLK035589:+:3977..4510
Molecular Weight (calculated)
20017.4 Da
IEP (calculated)
7.142
GRAVY (calculated)
-0.655
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQSTLHSLN PYSSSTTSSS SSSLHSRKGR IKGNKNQSMS TLSTDPQSVA ARERRHRISD RLKILQSMVP GGAKLDTVSM LDEAISYVKF LKAQIWFHHN
101: MLLFFNDYET TSPCTYSPVG VSEFESRLFG CDEDYTPVPK TYSQGTPLYM VADPNNPMWY SSVDDEQQET MHRRGLS
101: MLLFFNDYET TSPCTYSPVG VSEFESRLFG CDEDYTPVPK TYSQGTPLYM VADPNNPMWY SSVDDEQQET MHRRGLS
001: MDDFNLRSEN PNSSSTTSSS SSSFHRHKSE TGNTKRSRST STLSTDPQSV AARDRRHRIS DRFKILQSMV PGGAKMDTVS MLDEAISYVK FLKAQIWYHQ
101: NMLLFINDHE TTSSCTYSPG AGEFGPKLFG YDDDYAPIMD TYSQGVPLTV ADSKYTPWFG SVDDEQERDS S
101: NMLLFINDHE TTSSCTYSPG AGEFGPKLFG YDDDYAPIMD TYSQGVPLTV ADSKYTPWFG SVDDEQERDS S
Arabidopsis Description
Transcription factor bHLH140-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BD33]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.