Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G043780.1 | Barley | mitochondrion, nucleus | 17.24 | 41.67 |
| GSMUA_Achr4P23240_001 | Banana | nucleus | 40.0 | 39.73 |
| CDY15706 | Canola | nucleus | 51.03 | 34.91 |
| CDX90106 | Canola | nucleus | 48.97 | 33.33 |
| CDY27630 | Canola | nucleus | 49.66 | 29.75 |
| CDX84906 | Canola | nucleus | 49.66 | 29.51 |
| TraesCS1D01G347900.1 | Wheat | nucleus | 36.55 | 28.49 |
| TraesCS1B01G359000.1 | Wheat | nucleus | 35.86 | 27.96 |
| AT1G27740.1 | Thale cress | nucleus | 49.66 | 27.91 |
| CDY11768 | Canola | nucleus | 48.97 | 27.73 |
| TraesCS1A01G345200.1 | Wheat | nucleus | 35.17 | 27.42 |
| CDY11802 | Canola | nucleus | 38.62 | 24.35 |
| OQU83893 | Sorghum | nucleus | 36.55 | 21.9 |
| Zm00001d048786_P001 | Maize | nucleus, plastid | 33.79 | 21.03 |
| TraesCS3A01G440600.1 | Wheat | nucleus | 35.86 | 20.47 |
| TraesCS3B01G474700.1 | Wheat | nucleus | 35.17 | 20.08 |
| TraesCS3D01G433200.1 | Wheat | nucleus | 35.17 | 20.0 |
| GSMUA_Achr6P07760_001 | Banana | nucleus | 39.31 | 19.86 |
| CDX81461 | Canola | nucleus | 45.52 | 19.08 |
| CDY37221 | Canola | nucleus | 44.83 | 18.79 |
| GSMUA_Achr9P09600_001 | Banana | nucleus | 35.17 | 18.48 |
| TraesCS5B01G406100.1 | Wheat | nucleus | 34.48 | 18.18 |
| EER93400 | Sorghum | nucleus | 35.86 | 17.81 |
| TraesCS5A01G401300.1 | Wheat | nucleus | 35.17 | 17.65 |
| HORVU5Hr1G097520.1 | Barley | nucleus | 34.48 | 17.12 |
| TraesCS5D01G411600.1 | Wheat | nucleus | 35.17 | 17.0 |
| CDX72435 | Canola | nucleus | 39.31 | 16.29 |
| CDY49379 | Canola | nucleus | 39.31 | 16.29 |
| CDX69011 | Canola | nucleus | 38.62 | 16.14 |
| CDX75386 | Canola | nucleus | 38.62 | 16.14 |
| CDY28328 | Canola | nucleus | 38.62 | 15.73 |
| Os11t0634700-00 | Rice | extracellular | 37.93 | 15.32 |
| CDY66929 | Canola | nucleus, plastid | 17.24 | 14.12 |
| CDY55900 | Canola | nucleus, plastid | 17.24 | 14.12 |
| CDX68049 | Canola | nucleus | 27.59 | 13.79 |
| CDY55674 | Canola | nucleus | 27.59 | 13.79 |
| CDX96145 | Canola | nucleus | 27.59 | 13.79 |
| CDY11694 | Canola | nucleus | 27.59 | 13.79 |
| CDX85799 | Canola | nucleus | 20.0 | 13.55 |
| CDY64847 | Canola | nucleus | 20.0 | 13.49 |
| CDY18636 | Canola | nucleus | 18.62 | 13.17 |
| CDX91916 | Canola | cytosol | 15.86 | 12.92 |
| CDY61813 | Canola | nucleus | 26.9 | 12.79 |
| CDY58387 | Canola | nucleus | 26.9 | 12.7 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 17.93 | 12.56 |
| CDY30593 | Canola | nucleus | 17.93 | 12.21 |
| CDY21597 | Canola | nucleus | 18.62 | 12.11 |
| CDY12799 | Canola | nucleus | 17.93 | 11.93 |
| CDX68583 | Canola | nucleus | 18.62 | 11.89 |
| CDY01443 | Canola | nucleus | 17.93 | 11.87 |
| CDX83121 | Canola | nucleus | 18.62 | 11.74 |
| CDX74329 | Canola | cytosol | 14.48 | 11.54 |
| CDY17765 | Canola | nucleus | 17.93 | 11.5 |
| CDY43559 | Canola | nucleus | 17.93 | 11.26 |
| CDY63952 | Canola | nucleus | 17.93 | 11.26 |
| CDY48884 | Canola | nucleus | 18.62 | 8.06 |
| CDY32423 | Canola | nucleus | 17.93 | 7.88 |
| CDY51449 | Canola | nucleus | 17.93 | 7.83 |
| CDY62045 | Canola | nucleus | 17.93 | 7.76 |
| CDY48431 | Canola | nucleus | 16.55 | 7.48 |
| HORVU6Hr1G069690.3 | Barley | cytosol | 7.59 | 3.26 |
| CDY03946 | Canola | nucleus | 5.52 | 2.91 |
Protein Annotations
| EnsemblPlants:CDY03948 | EnsemblPlantsGene:GSBRNA2T00117458001 | Gene3D:4.10.280.10 | GO:A0A078EWM3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF105 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDY03948 | ProteinID:CDY03948.1 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE13DD | MapMan:15.5.32 | : | : |
Description
BnaC07g11730D
Coordinates
chrLK031947:+:1010323..1011176
Molecular Weight (calculated)
16423.3 Da
IEP (calculated)
9.134
GRAVY (calculated)
0.144
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDRNSSFRV NSVATGEILS LRRDGSVLLV EVLLQRSSGG VCQVLLLMPA RSHFGEFLTE LSLAILLLHL KRREKINERL KTLQNLVPNG TKVDISTMLE
101: EAVNYVKFLQ LQIKLLSSDD LWMYAPLAYN GIDMGFHHNL LSRLT
101: EAVNYVKFLQ LQIKLLSSDD LWMYAPLAYN GIDMGFHHNL LSRLT
001: MDVFVDGELE SLLGMFNFDQ CSSSKEERPR DELLGLSSLY NGHLHQHQHH NNVLSSDHHA FLLPDMFPFG AMPGGNLPAM LDSWDQSHHL QETSSLKRKL
101: LDVENLCKTN SNCDVTRQEL AKSKKKQRVS SESNTVDESN TNWVDGQSLS NSSDDEKASV TSVKGKTRAT KGTATDPQSL YARKRREKIN ERLKTLQNLV
201: PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDLWMYAPL AYNGLDMGFH HNLLSRLM
101: LDVENLCKTN SNCDVTRQEL AKSKKKQRVS SESNTVDESN TNWVDGQSLS NSSDDEKASV TSVKGKTRAT KGTATDPQSL YARKRREKIN ERLKTLQNLV
201: PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDLWMYAPL AYNGLDMGFH HNLLSRLM
Arabidopsis Description
BHLH54Transcription factor bHLH54 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.