Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031275.1-P | Field mustard | nucleus | 95.52 | 96.39 |
| CDY51449 | Canola | nucleus | 95.52 | 96.39 |
| CDY32423 | Canola | nucleus | 80.6 | 81.82 |
| CDY48884 | Canola | nucleus | 81.19 | 81.19 |
| AT3G21330.1 | Thale cress | nucleus | 89.55 | 80.43 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 24.18 | 48.5 |
| KRH47179 | Soybean | nucleus | 50.15 | 38.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.04 | 38.1 |
| KRH09982 | Soybean | nucleus | 50.45 | 37.98 |
| KRH44227 | Soybean | nucleus | 50.15 | 37.92 |
| Solyc03g121240.1.1 | Tomato | nucleus | 42.99 | 37.89 |
| PGSC0003DMT400006453 | Potato | nucleus | 42.99 | 37.31 |
| KRH23349 | Soybean | nucleus | 49.85 | 37.11 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 51.34 | 36.52 |
| CDX91916 | Canola | cytosol | 19.4 | 36.52 |
| CDX74329 | Canola | cytosol | 18.51 | 34.07 |
| CDY30593 | Canola | nucleus | 21.49 | 33.8 |
| CDX81342 | Canola | cytoskeleton, cytosol, nucleus | 20.6 | 33.33 |
| CDY18636 | Canola | nucleus | 20.3 | 33.17 |
| CDX68583 | Canola | nucleus | 22.09 | 32.6 |
| GSMUA_Achr8P24970_001 | Banana | nucleus | 33.13 | 31.9 |
| CDX83121 | Canola | nucleus | 21.79 | 31.74 |
| CDY12799 | Canola | nucleus | 20.3 | 31.19 |
| CDY17765 | Canola | nucleus | 20.9 | 30.97 |
| CDX85799 | Canola | nucleus | 19.7 | 30.84 |
| CDY64847 | Canola | nucleus | 19.7 | 30.7 |
| CDY01443 | Canola | nucleus | 20.0 | 30.59 |
| CDY21597 | Canola | nucleus | 20.0 | 30.04 |
| CDY43559 | Canola | nucleus | 20.6 | 29.87 |
| GSMUA_Achr3P25950_001 | Banana | nucleus | 31.34 | 29.83 |
| CDY63952 | Canola | nucleus | 20.3 | 29.44 |
| KXG33221 | Sorghum | nucleus | 34.03 | 27.27 |
| Os01t0707500-01 | Rice | nucleus | 31.64 | 26.97 |
| TraesCS3B01G281600.1 | Wheat | nucleus | 30.45 | 26.84 |
| TraesCS3A01G252200.1 | Wheat | nucleus | 30.75 | 26.68 |
| EES18589 | Sorghum | nucleus | 31.64 | 26.43 |
| TraesCS3D01G252700.1 | Wheat | nucleus | 30.45 | 26.42 |
| Zm00001d043699_P001 | Maize | nucleus | 33.13 | 26.3 |
| Zm00001d038863_P001 | Maize | nucleus | 31.04 | 26.26 |
| HORVU3Hr1G066600.2 | Barley | nucleus | 31.04 | 25.68 |
| TraesCS1A01G362800.1 | Wheat | nucleus | 29.85 | 25.32 |
| HORVU1Hr1G079450.1 | Barley | nucleus | 30.15 | 25.25 |
| TraesCS1D01G367700.1 | Wheat | nucleus | 30.15 | 25.19 |
| TraesCS1B01G380000.1 | Wheat | nucleus | 29.85 | 25.13 |
| Os05t0541400-00 | Rice | nucleus | 31.04 | 25.0 |
| Zm00001d011187_P001 | Maize | nucleus | 31.34 | 24.42 |
| CDY55900 | Canola | nucleus, plastid | 12.54 | 23.73 |
| CDY66929 | Canola | nucleus, plastid | 12.54 | 23.73 |
| Os01t0566800-00 | Rice | nucleus | 31.64 | 22.75 |
| Zm00001d044242_P001 | Maize | nucleus | 31.94 | 22.25 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 29.85 | 21.41 |
| HORVU3Hr1G048770.1 | Barley | plastid | 30.15 | 20.95 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 29.55 | 20.89 |
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 28.96 | 20.68 |
| CDY15706 | Canola | nucleus | 12.54 | 19.81 |
| OQU87026 | Sorghum | nucleus | 26.87 | 19.52 |
| CDY03948 | Canola | cytosol | 7.76 | 17.93 |
| CDX90106 | Canola | nucleus | 11.34 | 17.84 |
| CDY27630 | Canola | nucleus | 12.54 | 17.36 |
| CDX84906 | Canola | nucleus | 12.54 | 17.21 |
| CDY11694 | Canola | nucleus | 14.03 | 16.21 |
| CDX68049 | Canola | nucleus | 14.03 | 16.21 |
| CDX96145 | Canola | nucleus | 14.03 | 16.21 |
| CDY55674 | Canola | nucleus | 14.03 | 16.21 |
| CDY11768 | Canola | nucleus | 12.24 | 16.02 |
| CDY61813 | Canola | nucleus | 14.33 | 15.74 |
| CDY58387 | Canola | nucleus | 14.03 | 15.31 |
| CDX75386 | Canola | nucleus | 15.82 | 15.27 |
| CDX69011 | Canola | nucleus | 15.82 | 15.27 |
| CDY11802 | Canola | nucleus | 10.45 | 15.22 |
| CDY28328 | Canola | nucleus | 15.82 | 14.89 |
| CDY49379 | Canola | nucleus | 15.52 | 14.86 |
| CDX72435 | Canola | nucleus | 15.52 | 14.86 |
| CDY48431 | Canola | nucleus | 13.43 | 14.02 |
| CDX81461 | Canola | nucleus | 14.33 | 13.87 |
| CDY37221 | Canola | nucleus | 14.03 | 13.58 |
| CDY03946 | Canola | nucleus | 4.78 | 5.82 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078JA31 | UniProt:A0A078JA31 | EnsemblPlants:CDY62045 | ProteinID:CDY62045 |
| ProteinID:CDY62045.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00035880001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF293 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE32EF | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng39100DBnaCnng39100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA31]
Coordinates
chrLK034086:+:24426..25610
Molecular Weight (calculated)
37150.6 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.641
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLESVYAQ AMYGMNRQNK ITEHQGSDLI WGGNELIPRE LCSSSFSSYQ LINPNLGSCF MSDLGVIDEI QHQQHVGNRA ASIDPSSLEC LLSATTNTST
101: EDDEGISALF SDCQTLWSFG GGISSAESEN REITTDTTTK PKSLKRNRDE TGSHFRLVHH PQDDTEKGSF KLIYDENQTK SKKPRTEKGG GSSNISFGHS
201: ASLSDNAEPD AEAIAQMKEM IYRAAAFRPV NFGLETVEKP KRKNVKISTD PQTVAARQRR ERISEKIRVL QTLVPGGTKM DTASMLDEAA NYLKFLRAQV
301: KALENLRPKL DPTNLSFSSP LFHPSFLPMQ NPNQI
101: EDDEGISALF SDCQTLWSFG GGISSAESEN REITTDTTTK PKSLKRNRDE TGSHFRLVHH PQDDTEKGSF KLIYDENQTK SKKPRTEKGG GSSNISFGHS
201: ASLSDNAEPD AEAIAQMKEM IYRAAAFRPV NFGLETVEKP KRKNVKISTD PQTVAARQRR ERISEKIRVL QTLVPGGTKM DTASMLDEAA NYLKFLRAQV
301: KALENLRPKL DPTNLSFSSP LFHPSFLPMQ NPNQI
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.