Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87026 | Sorghum | nucleus | 83.49 | 77.87 |
| Zm00001d044242_P001 | Maize | nucleus | 78.6 | 70.27 |
| Os01t0566800-00 | Rice | nucleus | 67.67 | 62.45 |
| TraesCS3D01G208500.2 | Wheat | mitochondrion | 62.33 | 56.54 |
| TraesCS3A01G207300.2 | Wheat | extracellular | 61.4 | 56.53 |
| TraesCS3B01G233700.2 | Wheat | extracellular, mitochondrion, nucleus, plastid | 61.16 | 56.08 |
| HORVU3Hr1G048770.1 | Barley | plastid | 60.0 | 53.53 |
| GSMUA_Achr1P14400_001 | Banana | nucleus | 19.77 | 50.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.49 | 37.0 |
| Bra031275.1-P | Field mustard | nucleus | 24.42 | 31.63 |
| CDY51449 | Canola | nucleus | 24.42 | 31.63 |
| Zm00001d043699_P001 | Maize | nucleus | 30.93 | 31.52 |
| Bra001826.1-P | Field mustard | nucleus | 23.72 | 31.48 |
| CDY62045 | Canola | nucleus | 24.42 | 31.34 |
| Zm00001d038863_P001 | Maize | nucleus | 28.84 | 31.31 |
| CDY32423 | Canola | nucleus | 23.72 | 30.91 |
| Zm00001d050016_P001 | Maize | nucleus | 16.98 | 30.29 |
| Solyc03g121240.1.1 | Tomato | nucleus | 26.74 | 30.26 |
| PGSC0003DMT400006453 | Potato | nucleus | 26.98 | 30.05 |
| CDY48884 | Canola | nucleus | 23.26 | 29.85 |
| Zm00001d020705_P001 | Maize | nucleus | 16.28 | 28.93 |
| AT3G21330.1 | Thale cress | nucleus | 24.88 | 28.69 |
| Zm00001d031781_P001 | Maize | nucleus | 16.74 | 28.69 |
| Zm00001d005841_P001 | Maize | nucleus | 16.05 | 28.51 |
| KRH47179 | Soybean | nucleus | 26.98 | 26.91 |
| KRH23349 | Soybean | nucleus | 27.67 | 26.44 |
| KRH44227 | Soybean | nucleus | 26.98 | 26.19 |
| KRH09982 | Soybean | nucleus | 26.98 | 26.07 |
| Zm00001d049721_P001 | Maize | nucleus | 16.74 | 25.09 |
| VIT_09s0002g02700.t01 | Wine grape | nucleus | 27.21 | 24.84 |
| Zm00001d042988_P001 | Maize | nucleus, plastid | 10.47 | 21.33 |
| Zm00001d042989_P001 | Maize | nucleus, plastid | 10.47 | 21.33 |
| Zm00001d035027_P001 | Maize | nucleus | 16.51 | 21.19 |
| Zm00001d048786_P001 | Maize | nucleus, plastid | 9.3 | 17.17 |
| Zm00001d041351_P001 | Maize | nucleus | 11.86 | 16.78 |
| Zm00001d017804_P001 | Maize | nucleus | 11.4 | 16.61 |
| Zm00001d021988_P001 | Maize | nucleus | 10.7 | 15.59 |
| Zm00001d006733_P001 | Maize | nucleus | 10.0 | 15.04 |
| Zm00001d008444_P001 | Maize | nucleus | 10.23 | 13.54 |
| Zm00001d028085_P001 | Maize | nucleus | 8.14 | 11.82 |
| Zm00001d048141_P001 | Maize | cytosol | 8.37 | 11.39 |
Protein Annotations
| EntrezGene:103636015 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:AQK96119.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7V2Z4 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF303 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002211735 | EnsemblPlantsGene:Zm00001d011187 | EnsemblPlants:Zm00001d011187_P001 | EnsemblPlants:Zm00001d011187_T001 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
bHLH-transcription factor 92Putative HLH DNA-binding domain superfamily protein
Coordinates
chr8:-:142339407..142340699
Molecular Weight (calculated)
44529.1 Da
IEP (calculated)
6.182
GRAVY (calculated)
-0.283
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHNFSDMIS SESAWSGGVG AGDGAGSGMT VLERLVLDEA LAAAILELQG IQQAPACAGK EVVMVAEPTA GGGVVGEAAV AFPSMGMATP TPAYADVDAD
101: VLQRQQHHHR HHGAMGMPPD YDLTPATPAV TVTAVPPAFT SAAAYSGGNF VVGQSPAVFS TSNETTATAA AVTSTTSLNC EQGGGGGGGR RQRRANRKRK
201: AAAERSPVAA AQESTLCSLL ASTTTAGEGG IQIAFSNAAA AAKRSAKPSS LSSSGSSSIS FDGRNPETNC GGVDDPMYEP DTEALAQVKE MIYRAAAMRP
301: VSLGSEEDAG ERPRRRNVRI SSDPQTVAAR QRRERISERL RVLQKLVPGG AKMDTASMLD EAASYLRFLQ SQVRELQTLD RRNYGLTTAD NNASRATATM
401: AASGPLMSYN NGHGALPAFT FPAAAGETLY
101: VLQRQQHHHR HHGAMGMPPD YDLTPATPAV TVTAVPPAFT SAAAYSGGNF VVGQSPAVFS TSNETTATAA AVTSTTSLNC EQGGGGGGGR RQRRANRKRK
201: AAAERSPVAA AQESTLCSLL ASTTTAGEGG IQIAFSNAAA AAKRSAKPSS LSSSGSSSIS FDGRNPETNC GGVDDPMYEP DTEALAQVKE MIYRAAAMRP
301: VSLGSEEDAG ERPRRRNVRI SSDPQTVAAR QRRERISERL RVLQKLVPGG AKMDTASMLD EAASYLRFLQ SQVRELQTLD RRNYGLTTAD NNASRATATM
401: AASGPLMSYN NGHGALPAFT FPAAAGETLY
001: MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
101: TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI
201: YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT
301: LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT SFPLFHPSFL PLQNPNQIHH PEC
Arabidopsis Description
BHLH87Transcription factor bHLH87 [Source:UniProtKB/Swiss-Prot;Acc:Q8S3D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.